DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-55 and RBBP7

DIOPT Version :9

Sequence 1:NP_524354.1 Gene:Caf1-55 / 41836 FlyBaseID:FBgn0263979 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001185648.1 Gene:RBBP7 / 5931 HGNCID:9890 Length:469 Species:Homo sapiens


Alignment Length:415 Identity:359/415 - (86%)
Similarity:391/415 - (94%) Gaps:0/415 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHT 76
            |:|.|||||||||||||||||||||||||||||:|||||.||||:|||.:||||::|.|:|||||
Human    51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHT 115

  Fly    77 SDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNA 141
            |||||||::|.|.:|::|||||.||.|::||||||||||.||||.|||||||||||||||||||.
Human   116 SDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNP 180

  Fly   142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI 206
            .:|||||||||||||||||||:||:|||||.||||||||||||||||||.||:|:|||||||||:
Human   181 HIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTV 245

  Fly   207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH 271
            |||||||.|||.:::|||.|||||:|||||||||||||||||||||||||||||||:|.||||||
Human   246 CLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSH 310

  Fly   272 TVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336
            .|||||||||||||||||||||||||||||||||||||||||||:|||||||||||.||||||||
Human   311 LVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 375

  Fly   337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 401
            ||||||||||:||||||||||||.||||||||||||||||||||||||||||||||:||||||||
Human   376 LASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 440

  Fly   402 IMQVWQMAENVYNDEEPEIPASELE 426
            |||:||||||:|||||.::..||||
Human   441 IMQIWQMAENIYNDEESDVTTSELE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-55NP_524354.1 CAF1C_H4-bd 23..92 CDD:403473 54/68 (79%)
WD40 127..408 CDD:421866 254/280 (91%)
WD40 repeat 132..179 CDD:293791 40/46 (87%)
WD40 repeat 184..228 CDD:293791 33/43 (77%)
WD40 repeat 235..274 CDD:293791 35/38 (92%)
WD40 repeat 280..318 CDD:293791 36/37 (97%)
WD40 repeat 324..375 CDD:293791 47/50 (94%)
WD40 repeat 381..406 CDD:293791 23/24 (96%)
RBBP7NP_001185648.1 CAF1C_H4-bd 62..131 CDD:372002 54/68 (79%)
WD40 166..446 CDD:392136 253/279 (91%)
WD40 repeat 171..218 CDD:293791 40/46 (87%)
WD40 repeat 223..267 CDD:293791 33/43 (77%)
WD40 repeat 274..308 CDD:293791 31/33 (94%)
WD40 repeat 319..357 CDD:293791 36/37 (97%)
WD40 repeat 363..414 CDD:293791 47/50 (94%)
WD40 repeat 420..445 CDD:293791 23/24 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148299
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0264
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S514
OMA 1 1.010 - - QHG53987
OrthoDB 1 1.010 - - D250544at33208
OrthoFinder 1 1.000 - - FOG0001098
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101102
Panther 1 1.100 - - O PTHR22850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R552
SonicParanoid 1 1.000 - - X748
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.700

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