DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caf1-55 and wdr32

DIOPT Version :9

Sequence 1:NP_524354.1 Gene:Caf1-55 / 41836 FlyBaseID:FBgn0263979 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_998111.2 Gene:wdr32 / 405882 ZFINID:ZDB-GENE-040426-2314 Length:508 Species:Danio rerio


Alignment Length:242 Identity:62/242 - (25%)
Similarity:95/242 - (39%) Gaps:52/242 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 PSKPEPSGEC-------QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATP---- 215
            |:.|:.:.||       :|::...|    |.|.:......|.....|....||...|...|    
Zfish    39 PASPQATRECAGTQGSSRPEVTADG----GTGSASGSGCRGSGACDSLFSWICRRKIRRGPYVDP 99

  Fly   216 -KEH------------RVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSV----ADDQKLMIWDTR 262
             ::|            ...|:.|:.| .|.||..      |..|..|||    .:..:::::|..
Zfish   100 ARDHFRTMTRLYSSMSPAADSVNLSTQTHGAVFN------LEYSPDGSVLTVACEQTEVLLFDPV 158

  Fly   263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327
            ::...|.  .|:||...||.:.|  ....:.||.|.|.|:||||||.|..|:.|...|...:..:
Zfish   159 SSRHIKT--LVEAHEDCVNNIRF--LDNRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNI 219

  Fly   328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 374
            ::..|.. :|.:||.|..:..||.::.        .|||.|...|.|
Zfish   220 EYDTHTR-LLVTSGFDGNVITWDTNRF--------TEDGCPHKKFFH 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Caf1-55NP_524354.1 CAF1C_H4-bd 23..92 CDD:403473
WD40 127..408 CDD:421866 62/242 (26%)
WD40 repeat 132..179 CDD:293791 5/23 (22%)
WD40 repeat 184..228 CDD:293791 11/60 (18%)
WD40 repeat 235..274 CDD:293791 7/42 (17%)
WD40 repeat 280..318 CDD:293791 17/37 (46%)
WD40 repeat 324..375 CDD:293791 13/51 (25%)
WD40 repeat 381..406 CDD:293791
wdr32NP_998111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..75 8/39 (21%)
WD 1 126..165 9/44 (20%)
WD40 <129..279 CDD:295369 43/148 (29%)
WD40 <131..>294 CDD:225201 42/146 (29%)
WD40 repeat 132..167 CDD:293791 7/42 (17%)
WD 2 169..207 18/39 (46%)
WD40 repeat 174..210 CDD:293791 17/37 (46%)
WD 3 211..250 10/47 (21%)
WD40 repeat 216..242 CDD:293791 6/26 (23%)
WD 4 256..295 1/2 (50%)
WD40 repeat 261..288 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..343
WD 5 356..396
WD 6 419..457
WD 7 475..508
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0264
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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