DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31344 and Polr3h

DIOPT Version :9

Sequence 1:NP_650433.1 Gene:CG31344 / 41835 FlyBaseID:FBgn0051344 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001120767.1 Gene:Polr3h / 300088 RGDID:1305889 Length:204 Species:Rattus norvegicus


Alignment Length:26 Identity:6/26 - (23%)
Similarity:12/26 - (46%) Gaps:10/26 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 GAH----------RIKLKDQDFLEAT 217
            |||          |.::.|:.|::.:
  Rat   136 GAHDLYMDTGEEIRFRVVDESFVDTS 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31344NP_650433.1 DUF2236 100..>233 CDD:287016 6/26 (23%)
Polr3hNP_001120767.1 RNAP_III_Rpc25_N 2..81 CDD:239822
RNA_pol_Rbc25 83..201 CDD:400543 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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