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Protein Alignment CG31344 and rpb-7
DIOPT Version :9
Sequence 1: | NP_650433.1 |
Gene: | CG31344 / 41835 |
FlyBaseID: | FBgn0051344 |
Length: | 403 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_491093.1 |
Gene: | rpb-7 / 171877 |
WormBaseID: | WBGene00021845 |
Length: | 197 |
Species: | Caenorhabditis elegans |
Alignment Length: | 193 |
Identity: | 41/193 - (21%) |
Similarity: | 62/193 - (32%) |
Gaps: | 85/193 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 279 WHINTMLSVNANIFFAKRLACVKGYEYYSFDHENGVAQDPQQ---------KLHYYD------MG 328
||....|:: .:|| :.|.||| |...|:. |:..:: .|
Worm 14 WHATGALTL--RMFF-----------HLSLDHE--VCLHPKYFGPNLNETIKMKLFNEVEGTCTG 63
Fly 329 WWDRFI-------VSYGLF-----LVTYLHRY-ALVRWYLNFRVWLVDIFTYYLPYVAIW-KFGP 379
.:...| :.:||. .|.|..|| |:| :..|:..:||.....:..|.|: ..||
Worm 64 KYGFVIAVTTIDTIGHGLIQPGRGFVIYPVRYKAIV--FRPFKGQVVDGVVTQVNKVGIFCDIGP 126
Fly 380 KSAYV--------------------------RIFRNGGE-----------AQD-FALG-LKDD 403
.|.:: .:.||..| |.| ||:| |.||
Worm 127 LSCFISRHCIPPDMEFDPNSEKPCYKTNDEANVIRNDDEIRVKLIGTRVDANDIFAIGTLMDD 189
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG31344 | NP_650433.1 |
DUF2236 |
100..>233 |
CDD:287016 |
|
rpb-7 | NP_491093.1 |
PTZ00162 |
24..192 |
CDD:240298 |
38/181 (21%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1095 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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