DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and Sgsm2

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001361617.1 Gene:Sgsm2 / 97761 MGIID:2144695 Length:1050 Species:Mus musculus


Alignment Length:243 Identity:46/243 - (18%)
Similarity:98/243 - (40%) Gaps:54/243 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 QIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEEN-AF 271
            :|:||:.|.......|:..|   :.|||.|:....|...|:||.||...::|.||:.::.:. |:
Mouse   840 RIDKDVQRCDRNYWYFTTSN---LERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDNDQLAY 901

  Fly   272 WMMATIVEDL---LPA-----SYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKH-DIELSLIT 327
            ...:.:::.:   .|:     |::::           |.:||....|.:.|.:.:: |.......
Mouse   902 SCFSHLMKRMGQNFPSGGAMDSHFAN-----------MRSLIQILDSELFELMHQNGDYTHFYFC 955

  Fly   328 LHWFLTLFANVVHMKILVRIWDWFFYEGSI-----VLFQLTLGMLKVKEQDLKHLENSAQIFNSL 387
            ..|||..|...:..:.:..:|:..:....|     ||| :.|.:::...:.::.        |::
Mouse   956 YRWFLLDFKRELLYEDVFAVWEVIWAARRISSEHFVLF-IALALVEAYREIIRD--------NNM 1011

  Fly   388 SDIPGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRHLAYLMADQGHQI 435
                 :.||:...|.:..|           .|..:.:..:..|..|::
Mouse  1012 -----DFTDIIKFFNERAE-----------RHDAQEILRIARDLVHKV 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 38/181 (21%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
Sgsm2NP_001361617.1 RUN 42..185 CDD:367169
PH_RUTBC 256..424 CDD:275431
TBC <838..1006 CDD:214540 38/180 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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