DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and MSB3

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_014106.1 Gene:MSB3 / 855423 SGDID:S000005237 Length:633 Species:Saccharomyces cerevisiae


Alignment Length:531 Identity:126/531 - (23%)
Similarity:213/531 - (40%) Gaps:153/531 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DHEGYVGREEHTRKLQNLGSEDDLGELPP----MMEELSVADGLRPNPGGPFSALTASMWPQEIL 71
            |:.|..|.|:    |:.:.| |||..:|.    ...||.          |..||.:|:       
Yeast   104 DNNGDNGNED----LEEVHS-DDLDLVPDDDNRQRVELE----------GAASATSAN------- 146

  Fly    72 AKLGGGAELASGPNDQPEYRFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAHLEFS-H 135
                     ::|.|:.   .||.:||:.:..              ::.:|:....|:.:.::. .
Yeast   147 ---------SNGINNT---HFDRYGFKKQNN--------------YISEAEYDKWWVEYSQYCVR 185

  Fly   136 NKEAAELSWEHVDVMLP-----------RTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSET 189
            .|...:|..|...  ||           ::|:|:..||:|||...|...|...:....|..|::.
Yeast   186 RKHKWQLLLEKSG--LPVTDDSPSRFPSKSERLKRYVRKGIPAEWRGNAWWHFARGQEKLNKNKG 248

  Fly   190 SYHDIV-------KASSND-QLMTSKQIEKDLLRILPTNACFSNP--NGTGIP---RLRRILRGI 241
            .|..::       |.:.|: |:.....||:||.|..|.|..|.:.  |..|.|   .|||:|...
Yeast   249 VYSQLLRKMKQIKKQNPNEKQVQDLDIIERDLNRTFPDNIHFQSSLHNKEGPPIIKSLRRVLVAF 313

  Fly   242 AWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMHTLIA 306
            :...|.|||||....:...||||::||.||||:..|....|| ..::..|.|:..||.|:...:.
Yeast   314 SLYNPKIGYCQSMNFLAGLLLLFLDEERAFWMLVIITSRYLP-GVHNINLEGVNIDQGVLMLCVK 377

  Fly   307 NYL--------SSVDE-----------------SLRKHDI-----ELSLITLHWFLTLFANVVHM 341
            .|:        .|:|.                 :::|::.     .::|.|..||::.|..||.:
Yeast   378 EYIPEVWSYIKPSIDHHQKNNKTFSPSNKKVLFNMQKNEFLYRLPPITLCTASWFMSCFVGVVPI 442

  Fly   342 KILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHL-------------------------ENSA 381
            :..:||||..|||.|..||:::|.:||:.|.||..:                         ::..
Yeast   443 ETTLRIWDCLFYEESHFLFKVSLAVLKLSEHDLSKIKPRNNSLNYSWGSNLNQRGGSMGQEDSDM 507

  Fly   382 QIFNSLSDI------PGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRHLAYLMADQ------GHQ 434
            :||..:...      |.|:.: :::|::...: ..|.|..||..|:    ::.|.:      |..
Yeast   508 EIFQVIQTFPKTLLNPNEIFE-KIIFKRRFNL-NRLDQDEIDRCRK----FVAAQRLKFKTYGEL 566

  Fly   435 IGNPEAAPNLP 445
            :||..:..:||
Yeast   567 LGNSTSEADLP 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 78/256 (30%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
MSB3NP_014106.1 COG5210 15..540 CDD:227535 115/488 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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