DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and GYL1

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_013917.1 Gene:GYL1 / 855230 SGDID:S000004804 Length:720 Species:Saccharomyces cerevisiae


Alignment Length:539 Identity:103/539 - (19%)
Similarity:194/539 - (35%) Gaps:165/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EFSHNKEAAELS--W-----EHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSET 189
            :.::|:...|:|  |     ::.::::...|.|...:.:|||...|..:|..:|.|.:|      
Yeast   258 KINNNEIPEEVSSFWLKVIGDYQNILINDIETLHFQLSRGIPAAYRLVVWQLVSYAKSK------ 316

  Fly   190 SYHDIVKASSNDQLMTSKQIEKDLLRIL---PTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYC 251
            |:..|.:....:......|..::.|:::   |:..         :.|:..:|:......|:..:.
Yeast   317 SFDPIYETYLTEMAPFDVQEFENQLKMMDEVPSEY---------VKRISNVLKAYLLFDPECEFS 372

  Fly   252 QGTGVIVACLLLFMEEE-NAFWMMATIVEDLLPASYYSSTLLGIQADQRV------MHTLIANYL 309
            .....|:..:|...||| |||.::..:::      .|...||.:.:...:      ...|:..:.
Yeast   373 TDIAYIINMILDVCEEEANAFGLLVRLMK------VYGLRLLFLPSASEIDILCYKFDRLVEEFY 431

  Fly   310 SSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFYEG--SIVLFQLTLGMLKVKEQ 372
            ..:...:.:..:..|:....:|.|||...:..:|..||.|..|.||  ||:....||        
Yeast   432 PEIHNHMVEKGVRSSMFLPGFFTTLFQKKLPTEIQPRIGDMVFLEGIDSIMRILATL-------- 488

  Fly   373 DLKHLENSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRHLAYLMADQGHQIGN 437
                |.||                                        |.||..:..|.      
Yeast   489 ----LSNS----------------------------------------RDHLLKMGFDD------ 503

  Fly   438 PEAAPNLPKQQLARRQVRKSKSILEAFLFRGDGNEGDQLKNKNIRQTEILVD--LREAILKVGRH 500
                         ..::.|| .:|:|::.:.||..||.|.:..      .:|  |:::::||   
Yeast   504 -------------MLELLKS-GLLDAYIKQNDGTRGDTLLSNE------CMDKLLQDSMMKV--- 545

  Fly   501 FITIEPKLAGHIQLTANYST---ESHAKDHENFINVARTRKRRAKALHDFERH----DDDELGFR 558
              .|.||      ....||:   |.|..|:|..:   :.:....|.|| .::|    ::|.....
Yeast   546 --AITPK------TMKKYSSEYEEIHRLDNEKEV---QYKSITEKNLH-LQKHVRKLENDYTSLN 598

  Fly   559 RNDIITIISQKDEH-----CWVGELNGLRGWFPAKFVELLDERSKLYTSAGDDAISETVTDLVRG 618
            | :.:||.::..::     ..:.|.||.:       :::||.:.||.:.....         |.|
Yeast   599 R-EHVTIANELVKNRLNIESVLNENNGYK-------LQILDLKKKLDSEKKKQ---------VLG 646

  Fly   619 TLAP-AIKAFLEHGMKRPT 636
            ...| .:|..||..||:.|
Yeast   647 VYVPNDLKKDLEETMKKNT 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 44/225 (20%)
SH3_SGSM3 540..592 CDD:212747 11/60 (18%)
RUN 619..773 CDD:280855 7/19 (37%)
GYL1NP_013917.1 COG5210 27..569 CDD:227535 78/420 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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