DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and tbc1d30

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_017947631.1 Gene:tbc1d30 / 734068 XenbaseID:XB-GENE-5823666 Length:942 Species:Xenopus tropicalis


Alignment Length:356 Identity:81/356 - (22%)
Similarity:157/356 - (44%) Gaps:66/356 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 GIPHTLRAQMWMRL------SGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNAC 222
            |||...|.::|:.|      |.::...:....:::|  :::.:|..| ..||.|||.|...::.|
 Frog   258 GIPKEWRKRVWLTLADHYLHSISIDWDKTMRFTFND--RSNPDDDSM-GIQIVKDLHRTGCSSYC 319

  Fly   223 FSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFME--EENAFWMMATIVEDLLPAS 285
            ........:. |:|:|...|.....||||||..::.|.:|..||  |.:|..:|..:::.:||.|
 Frog   320 GQEAEQDRVV-LKRVLLAYARWNKTIGYCQGFNILAALILEVMEGNEGDALKVMIYLIDKVLPDS 383

  Fly   286 YYSSTLLGIQADQRVMHTLIANYLSSVDESL----RKHDIE---------LSLITLHWFLTLFAN 337
            |:::.|..:..|..|...|:...|..:.:.|    |..:.|         .::.|:.|||||||.
 Frog   384 YFANNLRALSVDMAVFRDLVRMKLPELSQHLDVLQRTANKESGGGYEPPLTNVFTMQWFLTLFAT 448

  Fly   338 VVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVLFR 402
            .:....:::|||..|:|||.:|.:::|.:.....:.::..:||...::::..:..|:        
 Frog   449 CLPNHTVLKIWDSVFFEGSEILLRVSLAIWAKLGEQIECCQNSDDFYSTMGRLTQEM-------- 505

  Fly   403 QALEVGGSLSQTVIDTHRRRHLAYLMADQGHQIGNPEAAPNLPKQQLARRQVRKSKSI------L 461
                    |..::||::......|.||             ..|..|||..:.:.:.:|      :
 Frog   506 --------LEDSLIDSNELMQTVYSMA-------------QFPFPQLAELREKYTYNITPFPAPV 549

  Fly   462 EAFLFRG------DGNEGDQLKNKNIRQTEI 486
            ::..|.|      |.:|.:::...::....:
 Frog   550 KSASFSGRTSKMRDSDEENEIDEDDVNANAV 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 63/231 (27%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc1d30XP_017947631.1 TBC 258..477 CDD:214540 63/222 (28%)
DUF4682 646..789 CDD:374060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.