DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d30

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_021331078.1 Gene:tbc1d30 / 569334 ZFINID:ZDB-GENE-030131-2064 Length:1063 Species:Danio rerio


Alignment Length:441 Identity:91/441 - (20%)
Similarity:163/441 - (36%) Gaps:134/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 GIPHTLRAQMWMRL------SGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNAC 222
            |||...|.::|:.|      |.::..::....:::|   .|:.|......||.|||.|...::.|
Zfish   239 GIPKEWRKRVWLTLADQYLHSISIDWEKTMRFAFND---RSNPDDDSLGIQIVKDLHRTGCSSYC 300

  Fly   223 FSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFME--EENAFWMMATIVEDLLPAS 285
            ........:. |:|:|...|.....:|||||..|:.|.:|...|  |.:|..:|..:::.:||.|
Zfish   301 GQEAEQDRVV-LKRVLLAYARWNKTVGYCQGFNVLAALILEVTEGNEGDALKVMIYLIDKVLPDS 364

  Fly   286 YYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIE---------------LSLITLHWFLTLF 335
            |:::.|..:..|..|...|:...|..:.:.|  |.::               .::.|:.||||:|
Zfish   365 YFANNLRALSVDMAVFRDLLRLKLPELSQHL--HHLQKVANREAGGSYEPPLTNVFTMQWFLTMF 427

  Fly   336 ANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVL 400
            |..:....:::|||..|:|||.:|.::.|.:.....:.::..:.:.:.::.:..:..|:      
Zfish   428 ATCLPHHTVLKIWDSVFFEGSEMLLRVALAIWAKLGERIEECQTADEFYSIMGCLTQEM------ 486

  Fly   401 FRQALEVGGSLSQTVIDTHRRRHLAYLMADQGHQIGNPEAAPNLPKQQLARRQVRKSKSILEAFL 465
                      |...:||::......|.||.             .|..|||               
Zfish   487 ----------LEHKLIDSNELMQTVYSMAP-------------FPFPQLA--------------- 513

  Fly   466 FRGDGNEGDQLKNKNIRQTEILVDLREAILKVGRHFITIEPKLAGHIQLTANYSTESHAKDHENF 530
                                   :|||      ::...|.|                        
Zfish   514 -----------------------ELRE------KYTYNITP------------------------ 525

  Fly   531 INVARTRKRRAKALHDFERHDDDELGFRRNDIITIISQKDEHCWVGELNGL 581
             ..|..|...:.|||.:|..||.::. ..:.|:|.:.     | :|.|.||
Zfish   526 -FPAPVRANSSLALHGWESDDDADMD-DEDSIVTALG-----C-LGPLGGL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 60/233 (26%)
SH3_SGSM3 540..592 CDD:212747 13/42 (31%)
RUN 619..773 CDD:280855
tbc1d30XP_021331078.1 TBC 239..458 CDD:214540 60/224 (27%)
DUF4682 625..775 CDD:318030
HrpB7 733..>820 CDD:330448
Herpes_BLLF1 <825..>973 CDD:330317
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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