DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d12a

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_021330042.1 Gene:tbc1d12a / 563626 ZFINID:ZDB-GENE-030131-3920 Length:823 Species:Danio rerio


Alignment Length:555 Identity:116/555 - (20%)
Similarity:200/555 - (36%) Gaps:156/555 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DHEGYVGRE-------------EHTRKLQ---------NLGSEDDLGELPPMMEELSVADGL--- 50
            :.:||.|.|             |..|:..         |..|:..||     .:...:||.|   
Zfish   301 EDDGYFGAEGCVDECLSSGNTFEGVRRQSAPDRVDVDPNASSDQTLG-----TKRHGIADFLTRS 360

  Fly    51 ----RPNPGGPFSALTASMWPQEILAKLGGGAELASGPNDQPEYRFDEFGFRVEEEDGP------ 105
                :|......::.:|..|      ||.|..:|...|.........|:..|.....||      
Zfish   361 LFSWKPKESRAVASHSAPGW------KLFGKIQLRDNPLKDSRTIQQEYESRAGPATGPPLHPPP 419

  Fly   106 --------EQSSNKLL-------SIP--FVEDAQQRLQ----WIAHLEFSHNKEA---------- 139
                    |..|...|       ::|  ..|::|:..|    .:|..:....|||          
Zfish   420 TRRKNLEFEPLSTTALILEDRPANLPAKSEEESQRHRQEYSEMVAGAKRREMKEAQKKKRQMKER 484

  Fly   140 ---------AELSWEHVDVMLPRTEKLRNMVR------QGIPHTLRAQMWMRLSG---------- 179
                     |.:.|.  ..:||..|.:||..|      ||:|.::|.::|....|          
Zfish   485 YRQEENIASAMVIWN--SEVLPNWESMRNTRRVRDLWWQGVPPSVRGKVWCLAIGNELNITPELY 547

  Fly   180 --ALAKKQKSETSYHDIVKASSN--------DQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRL 234
              .|::.::...|:.:....:.|        |:..:...|:.|:.|..|:...|.. .|.....|
Zfish   548 EIFLSRAKEKWRSFSETSSVNENEDCGVSLADRESSLDLIKLDISRTFPSLYIFQK-GGPYHDIL 611

  Fly   235 RRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQR 299
            ..:|.......||:||.||...|.|.|:|.:||.:||...|.::......:::           |
Zfish   612 HSVLGAYTCYRPDVGYVQGMSFIAAVLILNLEEADAFIAFANLLNKPCQMAFF-----------R 665

  Fly   300 VMHTLIANYLSSVD-----------ESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFY 353
            |.|.|:..|.::.:           :..:.:.:......:.|..||::..:.:.:..|:||.|..
Zfish   666 VDHDLMLKYFAAFEVFFEENLPRLFQHFQNNSLTPDFYLIDWIFTLYSKSLPLDVACRVWDVFCR 730

  Fly   354 EGSIVLFQLTLGMLKVKEQDLKHLE--NSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQT-V 415
            :|...||:..||:|::.:..|..::  :|||.   ||.:| |.|....||       ..::.| :
Zfish   731 DGEEALFRTGLGILRLYQDVLLQMDFIHSAQF---LSRLP-ENTPAHTLF-------SCIANTQM 784

  Fly   416 IDTHRRRHLAY--LMAD---QGHQIGNPEAAPNLP 445
            |..:||.:..:  |:.|   :..:|.|..:..|.|
Zfish   785 ISNNRRWNQVFSTLIKDRLKETDKISNSSSNSNSP 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 52/250 (21%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc1d12aXP_021330042.1 TBC 519..752 CDD:214540 51/244 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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