DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d17

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_005164004.1 Gene:tbc1d17 / 554092 ZFINID:ZDB-GENE-050522-79 Length:639 Species:Danio rerio


Alignment Length:454 Identity:95/454 - (20%)
Similarity:152/454 - (33%) Gaps:118/454 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HEGYVGREEHTRKLQN--------------LGSEDDLGELPPMMEELSVADGLRPNPGGPFSALT 62
            |.|  |..|..:.:|.              |....|.|.|....:||.:.|..        ||..
Zfish   150 HRG--GTRELLKAMQRYIRLAPSPMDGRLFLAYPHDSGALSQSFDELHLFDDT--------SADL 204

  Fly    63 ASMWPQEILAKLGGG----AELASGPNDQPEYRFD-------EFGFRVEEEDG------------ 104
            .|.:.|:..|...||    .....|....||...:       .|....:||.|            
Zfish   205 VSRFIQDPYATTFGGFSKVTNFFRGALRNPESPLNNRSPQDPHFPHSADEEPGFELITCGAELGP 269

  Fly   105 -PEQSSNKLLSIPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHV---DVMLPRTEKLRNMV-RQG 164
             ||....|.|.                            :||..   :..:...:|::.:| |.|
Zfish   270 RPEVKRGKPLD----------------------------NWEQFLDPEGRVTDPQKVKELVFRGG 306

  Fly   165 IPHTLRAQMWMRLSG-----ALAKKQ------KSETSYHDIV--KASSNDQLMTS-------KQI 209
            |...||.::|..|.|     :..|::      |::..:...|  |:.|.:|.|.:       ..|
Zfish   307 IVPYLRKEVWKFLLGFYPWNSTTKEREDILMVKTDEYFRMKVQWKSVSEEQEMRNSLFRGYRSLI 371

  Fly   210 EKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEE-NAFWM 273
            |:|:.|....|:.||.....|:..|..:|........|:||.||...:::.||...:.| .:||.
Zfish   372 ERDVNRTDRHNSFFSGNENPGLTLLHDVLMTYCMYNFDLGYVQGMSDLLSPLLFVTQNEVESFWC 436

  Fly   274 MATIVEDLLPASYYSS------TLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSL-ITLHWF 331
            :...: ||:..::..|      .||.:....|.:...:.:||.|.|..        || ....|.
Zfish   437 LTGFM-DLVHQNFEESQEAMKQQLLQLSLLLRALDPELCDYLDSQDSG--------SLCFCFRWL 492

  Fly   332 LTLFANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVT 395
            |..|......:.::.:|:..:.......|.|.:. ..:.|...:.|..|...|||:.....|:|
Zfish   493 LIWFKREFSFEDILSLWEVLWTRLPCENFHLLMA-CSILESQKEELIGSNHDFNSILKHINELT 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 55/242 (23%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc1d17XP_005164004.1 DUF3548 5..211 CDD:192931 15/70 (21%)
TBC 303..538 CDD:214540 54/244 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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