DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and Tbc1d5

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_008764990.1 Gene:Tbc1d5 / 501088 RGDID:1561626 Length:827 Species:Rattus norvegicus


Alignment Length:665 Identity:115/665 - (17%)
Similarity:231/665 - (34%) Gaps:239/665 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QQRLQWIAHLEFSHNKEAAEL-SW----EHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGAL 181
            |.:.|||:.::        || ||    :.:.:..||              .:..|..:.::..|
  Rat   100 QDKSQWISRIK--------ELRSWYSNIKEIHITNPR--------------KVVGQQDLMINNPL 142

  Fly   182 AKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLF- 245
            ::.:.|      :......|:.:.| .||:|:.|..|....|...|      :|:||..:.:.: 
  Rat   143 SQDEGS------LWNKFFQDKELRS-MIEQDVRRTFPEMQFFQQEN------VRKILTDVLFCYA 194

  Fly   246 ---PDIGYCQGTGVIVACLLLFME----------------------------EENAFWMMATIVE 279
               ..:.|.||...::|.::..:.                            |.:|:.|.:.::|
  Rat   195 RENEQLLYKQGMHELLAPIIFTLHCDHQAFLHASESAQPSEEMKTLLNPEYLEHDAYAMFSQLME 259

  Fly   280 DLLPASYYSSTLLGIQAD-QRVMHTL-----------------IANYLSSV-DESLRKHDIEL-- 323
            ...|  ::|:    .:.| |:...||                 |...::.: |..|:|||.||  
  Rat   260 TAEP--WFST----FEHDGQKGKETLMPPIPFARPQDLGPTVAIVTKVNQIQDHLLKKHDTELYM 318

  Fly   324 ---------SLITLHWFLTLFANVVHMKILVRIWDWFFYEG---SIVLFQLTLGMLKVKEQDLKH 376
                     .:..|.|...||.....::.|:.:||..|.:|   |:|.:..|..:|.:::..:. 
  Rat   319 HLNRLEIPPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGLHLSLVDYVFTAMLLYIRDALIS- 382

  Fly   377 LENSAQIFNSLSDIPGEVTDVEVLFRQALEV------------------------GGSL---SQT 414
             .|.......|...| .:.|:..|..:||.:                        |..|   |:|
  Rat   383 -SNYQTCLGLLMHYP-LIGDIHSLILKALFLRDPKRNPRPVTYQFHPNLDYYKARGADLMNKSRT 445

  Fly   415 -----VIDTHRRRHLAYLMADQGHQIGNPEAAPN------------------LP----------- 445
                 .::.|:   ::..:.:.|.::..|.:||.                  :|           
  Rat   446 NARGAPLNIHK---VSNSLINFGRKLIAPASAPGSMGGPVPGSNSSSSFSAAVPFRTSAEAPRHH 507

  Fly   446 ------KQQLARRQVRKSKSILEAFLFRGDG-----NEGDQLKNKNIR---QTEILVDLREAILK 496
                  :||..::|.::.:...:..|.:.:.     |:||.:...:.:   ..:.|.||:....|
  Rat   508 SQQQRQQQQQQQQQQQQQQQQQQQRLMKSESMPVQLNKGDVVTGSDAQVSVPVQALTDLQGQSPK 572

  Fly   497 VGRHFITIEP---KLAGHIQLTANYSTESHAKDHENFI-NVARTRKR-RAKALHDFERHDDDELG 556
            .    |:..|   .|.|..:...  |..|.|...::|. ::||:|.. :|....:.|...:.::.
  Rat   573 T----ISSSPSMESLPGGREPPG--SPPSSATKRDSFFSHIARSRSHSKAMGRKESEEELEAQIS 631

  Fly   557 FRRNDIITIISQKDEHCWVGELNGLRGW--FPAKFVEL-------------LDERSKLYTS-AGD 605
            |.:                |:||.|...  :.||.:::             |::..::..| || 
  Rat   632 FLQ----------------GQLNDLDAMCKYCAKVMDMHLVNIQDVVLQENLEKEDQILVSLAG- 679

  Fly   606 DAISETVTDLVRGTL 620
               .:.:.|:::|:|
  Rat   680 ---LKQIKDILKGSL 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 50/278 (18%)
SH3_SGSM3 540..592 CDD:212747 9/53 (17%)
RUN 619..773 CDD:280855 1/2 (50%)
Tbc1d5XP_008764990.1 TBC 79..381 CDD:214540 60/321 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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