DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and grtp1

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001005632.1 Gene:grtp1 / 448089 XenbaseID:XB-GENE-950226 Length:342 Species:Xenopus tropicalis


Alignment Length:355 Identity:101/355 - (28%)
Similarity:171/355 - (48%) Gaps:41/355 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RFDEFGF-RVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHV---DVML 151
            |.|.:|| |..|.|           ..|.|      ::||.......:.|  :.|..:   ...:
 Frog    14 RIDGYGFVRPAEFD-----------YAFYE------EFIARYHVVLTRRA--IKWSKLLQQSAAV 59

  Fly   152 PRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSY--HDIVKASSNDQLMTSKQIEKDLL 214
            .:..|::..:|:|||:..|:.:||.:|||.|:...: |.|  ....:...|.:|:  ..:..||.
 Frog    60 EKNMKVKRYIRKGIPNEHRSHVWMVVSGAQAQMDMN-TGYFRRMFTEGEKNPKLL--DLVITDLN 121

  Fly   215 RILPTNACF-SNPNGTGIPRLRRILRGIAWLF----PDIGYCQGTGVIVACLLLF-MEEENAFWM 273
            |..|.|..| .|.|    |.|::.|..:...:    ..:|||||...|...|:|. .:||.|||:
 Frog   122 RTFPDNVLFQKNAN----PSLQKDLYNVLVAYGQHNKTVGYCQGMNFIAGYLILVTKDEEKAFWL 182

  Fly   274 MATIVEDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANV 338
            |..::..:|| .|||..:.|::.||.|:..|:...:.||.:.:..|.:..:|:...||:.||.::
 Frog   183 MDALIGQILP-DYYSPAMTGLKTDQEVLGDLVKKKIPSVAQLIETHGVMWTLLVSRWFICLFIDI 246

  Fly   339 VHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDI-PGE-VTDVEVLF 401
            :.::.::||||..|:|||.|:|::.|.::|..:..:....|...|.:...:| .|| |||.....
 Frog   247 LPVETVLRIWDCLFFEGSKVIFRVALTLIKQSQASIMEARNFPDICDKFKEITKGEFVTDCHYFM 311

  Fly   402 RQALEVGGSLSQTVIDTHRRRHLAYLMADQ 431
            ::.....||||:|.||..|.:....|::::
 Frog   312 QKIFAEPGSLSKTTIDKLREKQRLKLISEE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 70/221 (32%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
grtp1NP_001005632.1 TBC 69..283 CDD:214540 70/221 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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