DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and Tbc1d22

DIOPT Version :10

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_650941.3 Gene:Tbc1d22 / 42498 FlyBaseID:FBgn0038855 Length:546 Species:Drosophila melanogaster


Alignment Length:497 Identity:98/497 - (19%)
Similarity:164/497 - (32%) Gaps:168/497 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LSVADGLRPNPGGPFSALTASMW------------PQEILAK-------LGGGAELASG------ 83
            ::||.|..|.||    |.:::.|            |:..|.|       :|.||...||      
  Fly    35 VTVASGAGPTPG----ANSSTFWKNSGRRVPGRPSPKRELEKAAAVGVAVGRGAAPGSGMVSTFT 95

  Fly    84 -----PNDQPEYRFDEF---------------------------------------------GFR 98
                 .:|..:...|||                                             ..|
  Fly    96 EYQKSVSDAWDMGDDEFCIISSTEAAAAAVGAGDAAHFSRQVSQTVALNVIETHSRSNQNHNASR 160

  Fly    99 VEEEDG----PEQSSN------KLLSIPFVEDAQQRLQ------WIAHLEFSHNKEAAELSWEHV 147
            ...|.|    |..||:      ...|:|...:.:.||:      .:..:..:......|...|..
  Fly   161 SANESGADLVPVSSSSTDDCKEDRRSLPDSNENRSRLRNYPGRPQLQKISSNCQDSEYETKIEKF 225

  Fly   148 DVML--PRTE--KLRNMVRQGIPHTLRAQMWMRLSGAL------------AKKQKSETSYHDIVK 196
            .|:|  |:.:  .|:.:...|:|..:||..|..||..|            :|:|..:...|:..:
  Fly   226 QVVLDSPQLDLVALKKISWSGVPRKMRAVSWRLLSKYLPPSSERRMAVLESKRQGYQDLRHNYFR 290

  Fly   197 ASSNDQLM--TSKQIEKDLLRILPTNACFSNPNGTGIP---------RLRRILRGIAWLFPDIGY 250
            ..|.|:..  |.:||..|:.|:        ||.   ||         ...|||...|...|..||
  Fly   291 VDSQDETQQDTYRQIHIDVPRM--------NPQ---IPLFQQQLVQEMFERILFIWAIRHPASGY 344

  Fly   251 CQG-TGVIVACLLLFME-------------------------EENAFWMMATIVEDLLPASYYSS 289
            .|| ..::....::|::                         |.::||.::..: |.:..:|..:
  Fly   345 VQGINDLVTPFFIVFLQEALTPNTDLEKYDMSTLPEETRNIIEADSFWCLSKFL-DCIQDNYIFA 408

  Fly   290 TLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFYE 354
            . ||||.....:..||.....::...|:.|.::....:..|...|....:.:...:|:||.:..|
  Fly   409 Q-LGIQEKVNQLKDLIQRIDVNLHRHLQAHGVDYLQFSFRWMNNLLTRELPLHCTIRLWDTYLAE 472

  Fly   355 G-SIVLFQL---TLGMLKVKEQDLKHLENSAQ-IFNSLSDIP 391
            . ...||.|   ...:|..|||.::  :|..| :...|.::|
  Fly   473 SDGFALFHLYVCAAFLLHWKEQLMQ--QNDFQGLMLLLQNLP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 58/266 (22%)
SH3_SGSM3 540..592 CDD:212747
RUN_SGSM3 570..783 CDD:439050
Tbc1d22NP_650941.3 TBC 243..496 CDD:214540 58/265 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.