DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and tbc1d5

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001315187.1 Gene:tbc1d5 / 393583 ZFINID:ZDB-GENE-040426-1197 Length:863 Species:Danio rerio


Alignment Length:677 Identity:124/677 - (18%)
Similarity:233/677 - (34%) Gaps:255/677 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QQRLQWIAHLEFSHNKEAAELSWEHV----------DVMLP---------------RTEKLRNMV 161
            :.:.|||:..: .|..:..::...|:          |:::.               :.::||.|:
Zfish    92 EDKAQWISRTK-EHRAQYEKIKEMHITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELRGMI 155

  Fly   162 RQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIV--KASSNDQLMTSKQIEKDLLRILPTNAC-- 222
            :|.:..|....::.       :::...|...||:  .|..|:||:..:.:.:.|..|:....|  
Zfish   156 KQDVLRTFPEMLYF-------QEEDVRTKMTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDH 213

  Fly   223 --FSNPNGTGIPR-LRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPA 284
              |.:.:.|..|. ..::|     |.|.                 ..|.:|:.|.:.::|...| 
Zfish   214 QAFQHASETANPSDEMKVL-----LDPK-----------------FHEHDAYTMFSLLMETAEP- 255

  Fly   285 SYYSSTLLGIQADQRVMHTLI-----------------ANYLSSVDESLRKHDIEL--------- 323
             ::||....::..:..|.|.|                 .|.:.  |:.::||||||         
Zfish   256 -WFSSFEREVRKGKEEMLTSIPFARPQDSGPSVAIVTKVNRIQ--DQLIKKHDIELYMHLNRLEI 317

  Fly   324 --SLITLHWFLTLFANVVHMKILVRIWDWFFYEGSIVL----------------------FQLTL 364
              .:..:.|...||.....::.|:.:||..|.: ||.|                      ||..|
Zfish   318 APQIYGIRWVRLLFGREFPLQDLLVVWDALFAD-SITLDLVDYVFVAMLLYIRDALIASNFQTCL 381

  Fly   365 GMLKVKEQDLKHLENSAQIFN------SLSDIPGEVTDVEVLFRQALEV----GGSL-------- 411
            |:       |.|......|.:      .|.|.......|...|:|.|:.    |..|        
Zfish   382 GL-------LMHYPPIGDIHSLLLKALFLRDPKNNPRPVNYQFQQNLDYYKTRGADLVNKTRAST 439

  Fly   412 ----------SQTVIDTHRRRHLAYLMADQGHQIG-----NPE--AAPNLPKQQLARRQVRKSKS 459
                      |.::::..|:     |:|..|...|     |.|  :||.||..  |.|.:.::.|
Zfish   440 KAAPLNINKVSSSLLNFGRK-----LIAPMGGGSGGISPINSEVLSAPPLPAP--ASRPLTEAPS 497

  Fly   460 ILEAFLFRGDGNEGDQLKNKNIRQTE----------ILVDLREAILKVGRHFIT----IEPKLAG 510
            .....        ..|:|::.:.||:          :.|.|.:.:...|...|:    |...:.|
Zfish   498 CPAPL--------NTQMKSQPLPQTQHQHRLLKSESMPVHLSKDVGSCGASQISLPAQIHSDITG 554

  Fly   511 HIQLT--ANYSTE--SHAKDH---------------------------ENFINVARTRKRRAKAL 544
            |...|  ::.|||  |.::||                           ::|.|::|:|. .:|.:
Zfish   555 HSSRTVSSSPSTESLSCSRDHAMSSPPLPVSRGRDSSTSSPPSSATKKDSFFNISRSRS-HSKTI 618

  Fly   545 HDFERHDDDELGFRRNDIITIISQKDEHCWVGELNGLRGW--FPAKFV-------------ELLD 594
            :   :.|.:||..:    ::.:.        |::|.|...  :.||.:             |.|:
Zfish   619 N---KKDAEELEAQ----VSFLQ--------GQINDLEAMSKYCAKMMNAHIGKIQDVILQEHLE 668

  Fly   595 ERSKLYTS-AGDDAISETVTDLVRGTL 620
            :..::..| ||    .:.:.|:::|.|
Zfish   669 KEDEVLVSLAG----LKQIKDILKGAL 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 50/270 (19%)
SH3_SGSM3 540..592 CDD:212747 9/66 (14%)
RUN 619..773 CDD:280855 1/2 (50%)
tbc1d5NP_001315187.1 TBC 71..373 CDD:214540 55/315 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.