DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and CG8155

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_611029.3 Gene:CG8155 / 36698 FlyBaseID:FBgn0034009 Length:1098 Species:Drosophila melanogaster


Alignment Length:653 Identity:126/653 - (19%)
Similarity:210/653 - (32%) Gaps:228/653 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 FRVEEEDGPEQSSNKLLS--------IPFV--EDAQQRLQ-------WIAHLE------------ 132
            |.|..|...|.|..:.::        .|||  .:....||       ::.|::            
  Fly   107 FTVVRECETEASPGRSITGAPAPATPAPFVPARELMSPLQSLGVSQKYVQHMQTKLGSSILNQME 171

  Fly   133 --FSHNKEAAELSWEHVDVMLPR-----------TEKLRNMVRQ----------GIPHTLRAQMW 174
              ||..::|..||.||:..:.||           .:.|..:.|:          ||..:||..:|
  Fly   172 KTFSIVQKAFNLSEEHMANLPPRPPMCDSEFRLFLDALGQIQRKDELHRVIFLGGIDPSLRRVVW 236

  Fly   175 MRL-----SGA-------------LAKKQKSETSYHDIVKAS------SNDQLMTSKQIEKDLL- 214
            ..|     .||             :.:|.:......|..||:      :.:....:..::||:| 
  Fly   237 KHLLNVYPGGANGLALDGHQRMEFMRRKSEQYCRLRDTWKAAVKRGSVAGELAYVTSMVKKDVLR 301

  Fly   215 --RILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATI 277
              |:.|..|  .:.:...|..|..||...|...|.:.||||...|.:.||:.|.:|...::....
  Fly   302 TDRLHPFYA--GSDDNQNIAALFNILTTYALNHPSVSYCQGMSDIASPLLVTMNDEAQAYICFCA 364

  Fly   278 VEDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVD----ESLRKHDIELSLITLHWFLTLFANV 338
            :...:..::   .|.||...|:..|  :...||..|    |.|:....:..|....|        
  Fly   365 IMSRMRGNF---MLDGIAMTQKFAH--LTEALSFYDPEFWEYLKSQQADDLLFCYRW-------- 416

  Fly   339 VHMKILVRIWDWFFYEGSIVLFQLTLGMLKVK---EQDLKHLE------------NSAQIFNS-- 386
                :|:.:...|.:|.::.:.::....|:.:   |::|...|            |||..|:|  
  Fly   417 ----LLLELKREFPFEDALRMLEVQWSSLRYRCDGEKELALFEKEFVPITDASVPNSASTFSSSY 477

  Fly   387 ---------LSDIPGE--VTDVEVLFRQALEVG-GSLSQTV---------------IDTHRRRHL 424
                     |...|.|  .|.|..|.||:.... .|||.:|               :|.:..||.
  Fly   478 SATPTSPSYLLTKPRESPYTKVCALRRQSSSASLSSLSSSVGTSHGLDNTKRLNHSLDDNMSRHA 542

  Fly   425 AYLMADQG------HQIGNPEAAPNLPKQQLARRQV--------------------RKSKSILEA 463
            ......|.      ||..:......|.:..|..|.|                    ::|.|.||.
  Fly   543 TAAARRQRRTSAKVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDDVFDRKESPSFLET 607

  Fly   464 FLFRGDGNEGDQ--------------------------------LKNKNIRQTEILV-------- 488
            ..|:.|.....:                                |::|||.....::        
  Fly   608 NPFKDDAQRAPERETTPPVSPGRAFLCSSSSSNLDEDPSDRKAKLQHKNIMTVSNIIAKQLATNA 672

  Fly   489 -DLREAILKV----GRHFITIEPKLAGHIQLTANYSTESH-----------AKDHENFINVARTR 537
             .:.|::.:|    |.||..::.|||...::..::..|..           .|:...|:|.|...
  Fly   673 SQVSESMKRVSTSSGGHFKDLKEKLAASSRIGISFDGEGEDDGDRKMPPKLVKNFNEFLNFATIN 737

  Fly   538 KRR 540
            |.|
  Fly   738 KNR 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 51/257 (20%)
SH3_SGSM3 540..592 CDD:212747 1/1 (100%)
RUN 619..773 CDD:280855
CG8155NP_611029.3 TBC 225..439 CDD:214540 48/232 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456638
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.