Protein Alignment CG12241 and RN-tre

DIOPT Version :10

• Sequence 1: NP_650432.1
• Gene: CG12241 / 41834
• FlyBaseID: FBgn0038304
• Length: 804
• Species: Drosophila melanogaster
• Sequence 2: NP_652381.1
• Gene: RN-tre / 36554
• FlyBaseID: FBgn0020620
• Length: 571
• Species: Drosophila melanogaster
• Alignment Length: 530
• Identity: 111/530 - (20%)
• Similarity: 197/530 - (37%)
• Gaps: 144/530 - (27%)

  Fly    84 PNDQPEYRFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAH---LEFSHNKEAAEL--S 143
            |..:..:|.|::||..:..            :|...|||:     .|   :|...:|:..::  .
  Fly    41 PTFEIYHRTDKYGFLHDSR------------LPSTRDAQE-----VHRNKIEMERDKKWMKMLNQ 88

  Fly   144 WEHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRL----------SGA------LAKKQKSETSYH 192
            |.      |..:||...|.:|||..:|...|.:|          :|.      ||:|..:||
  Fly    89 WP------PPQDKLHKRVYKGIPDRVRMVAWNKLLDIQQSINNNAGVYLRMLQLARKYSTET--- 144

  Fly   193 DIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVI 257
                          :||:.|:.|....|..|..........|..:|...:....::|||||...:
  Fly   145 --------------RQIDADVNRQFRDNLAFRERYSVKQCSLFNVLNAYSIYNSELGYCQGMACV 195

  Fly   258 VACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMH------TLIANYLSSVDESL 316
            ...|||::.||.|||.:.|::.|    ..|....|.|:...::..      .:::..:..:.:..
  Fly   196 AGVLLLYLHEEEAFWALNTLITD----QKYGMHGLFIEGFPKLTRFIDHHDRIMSKIMRKLHKHF 256

  Fly   317 RKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSA 381
            .||:::..|..:.||..:|...|...:.:|:||.|..:|..|:..:.:.:|.:.:.:|..|::..
  Fly   257 TKHNVDALLYAIKWFFVVFVERVPFSLSLRVWDIFMLDGDRVILSMAITILYLHKDELLRLKDMD 321

  Fly   382 QIFNSLSDIPGEV--------TDVEVLFRQALE-VGGSLSQTVIDTHRRRHLAYLMADQGHQIGN 437
            .|...|     :|        :|.:.:  |||| |...|....:|                 :..
  Fly   322 AIIEYL-----QVRLHKNFGYSDDDAI--QALERVMKKLKDLKLD-----------------VPP 362

  Fly   438 PEAAPNLPKQQLARRQVRKSKSILEAFLFRGDGNEGDQLKNKNIRQTEILVDLREAILKVGRHFI 502
            |..:...|.::|                  ||..|.|..|....|:.    |..:|..:|....|
  Fly   363 PAKSNEFPTRKL------------------GDFVEADMEKKIGRRRN----DYTDAEKQVITDVI 405

  Fly   503 TIEPKLAGHIQLTANYSTESHA-------KDHENFINVARTRKRRAKALHDFERHDDDELGFRRN 560
            :.:.:.|..:|.|.:|.|...|       |..|:..::|.:....:.:|:        ..||
  Fly   406 SRQEQNAIDVQSTVSYETSECATGDGYSMKTFESITSLATSPANSSYSLY--------SNGF--- 459

  Fly   561 DIITIISQKD 570
            .:.||.|::|
  Fly   460 VVTTIDSEQD 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12241	NP_650432.1	TBC	161..375	CDD:214540	53/235 (23%)
		SH3_SGSM3	540..592	CDD:212747	7/31 (23%)
		RUN_SGSM3	570..783	CDD:439050	1/1 (100%)
RN-tre	NP_652381.1	TBC	100..315	CDD:214540	53/235 (23%)