DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and Tbc1d10b

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001102391.1 Gene:Tbc1d10b / 365372 RGDID:1309191 Length:795 Species:Rattus norvegicus


Alignment Length:489 Identity:127/489 - (25%)
Similarity:205/489 - (41%) Gaps:101/489 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EHTRKLQNLGSEDDL--------GELPPMMEELSVADGLRPNPGGPFSALTASMWPQEILAKLGG 76
            |.|...|:|||...|        |:.|   :.||..|.: ....|...:||      :.::.:|.
  Rat   221 ETTENFQDLGSTSSLGPGISGPRGQAP---DTLSYLDSV-SLMSGTLESLT------DDVSSVGS 275

  Fly    77 GAELASGPNDQPEYRFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQR-LQWIAHLEFSHNKEAA 140
            .:|:    |.....:.|::||.    .|.:.|.:...||| |:.|:|| |:|   ||...|.:  
  Rat   276 DSEI----NGLALRKTDKYGFL----GGSQYSGSLESSIP-VDVARQRELKW---LEMFSNWD-- 326

  Fly   141 ELSWEHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMT 205
              .|     :..|.:|::...|:|||.:|||:.|..||.:....:::...:.::.:|..:.:.: 
  Rat   327 --KW-----LSRRFQKVKLRCRKGIPSSLRAKAWQYLSNSKELLEQNPGKFEELERAPGDPKWL- 383

  Fly   206 SKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENA 270
             ..|||||.|..|.:..|:...|.|...|.|||:......||.||||....:.|.||:.|..|.|
  Rat   384 -DVIEKDLHRQFPFHEMFAARGGHGQQDLYRILKAYTIYRPDEGYCQAQAPVAAVLLMHMPAEQA 447

  Fly   271 FWMMATIVEDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLF 335
            ||.:..|.:..|| .|||:.|..||.|..:...|:..........||:..|:..|....||:.:|
  Rat   448 FWCLVQICDKYLP-GYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQRIDPVLYMTEWFMCIF 511

  Fly   336 ANVVHMKILVRIWDWFFYEGSIVLFQLTL-----------------GMLKVKEQDLKHLENSAQ- 382
            |..:....::|:||.||.||..::|::.|                 ||.:..|| |::|..... 
  Rat   512 ARTLPWASVLRVWDMFFCEGVKIIFRVALVLLRHTLGSVEKLRSCQGMYETMEQ-LRNLPQQCMQ 575

  Fly   383 ---IFNSLSDIPGEVTDV------------------EVLFRQALEVGGSLSQTVIDTHRRRHLAY 426
               :.:.::.:|  ||:.                  |:.:|.:..:.||   ..|...|||.   
  Rat   576 EDFLVHEVTTLP--VTEALIERENAAQLKKWRETRGELQYRPSRRLHGS---RAIHEERRRQ--- 632

  Fly   427 LMADQGHQIGNPEAAPNLPKQQLARRQVRKSKSI 460
                      .|...|:.....|...:.|.|:::
  Rat   633 ----------QPPLGPSSSLLSLPSLKSRGSRAV 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 71/230 (31%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
Tbc1d10bNP_001102391.1 TBC 340..545 CDD:214540 67/207 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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