DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and CG1695

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster


Alignment Length:484 Identity:97/484 - (20%)
Similarity:170/484 - (35%) Gaps:132/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EGYVGREEHTRKLQNLGSE-------------DDLGELPPMMEELSV------------------ 46
            |..:|:|...::..||..|             .|..|:|.:.|:|.:                  
  Fly   760 EPELGQEAEEQEQSNLEEEVFEKQEDEEDQEDHDQREMPRLSEKLVLEFQNIDNMEPLRLQENCF 824

  Fly    47 AD-------GLRPNPGGPFSALTASMWPQEILAKLGGGAEL----ASGPNDQPEYRFDEF----G 96
            ||       ||..:..|....|:....|.....:..|...|    |....::|..:..:|    .
  Fly   825 ADSETENDLGLGLDSSGNILMLSIKSSPSTSSYETVGNEFLDMAEAKLEEEEPPGQLSKFHSADD 889

  Fly    97 FRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHVDVMLPRTEKLRNMV 161
            .|::.:| .|:||....::...|        .|.|:...:....|.:.....:|.|..|.:    
  Fly   890 VRLDNQD-EEESSQPATAVIITE--------AASLDALDDDPTEEFTSRKTSLMSPLNEDI---- 941

  Fly   162 RQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQL----------MTSKQIEKDLLRI 216
                  |:.|.:     .||.:.:.:..|     .||||..:          :...:||||:.|.
  Fly   942 ------TVVASL-----DALQEPKSACVS-----PASSNGGVYSVELLEQFGLNLHRIEKDVQRC 990

  Fly   217 LPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFW-----MMAT 276
            ......|:|.|   :.:||.::....|...|:||.||...:||.||:..::|:..:     :|..
  Fly   991 DRNYWYFANEN---LDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMER 1052

  Fly   277 IVEDLLPASYYSSTLLGIQ-ADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVH 340
            ::|     ::.|...:.:. |:.|.:..::.:.:..:.:|  ..|.........|||..|...:.
  Fly  1053 MIE-----NFPSGGAMDMHFANMRSLIQILDSEMYDLMDS--NGDYTHFYFCYRWFLLDFKRELV 1110

  Fly   341 MKILVRIWD--W---FFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVL 400
            ...:...|:  |   ....|..||| |.|.:|:.....:  |.||.           :.|||...
  Fly  1111 YDDVFATWEVIWAAKHIASGHFVLF-LALALLETYRDII--LSNSM-----------DFTDVIKF 1161

  Fly   401 FRQALEVGGSLS------------QTVID 417
            |.:..|...:.|            ||:|:
  Fly  1162 FNEMAERHNAQSILQLSRSLVLQLQTIIE 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 50/234 (21%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
CG1695NP_728346.2 RUN 63..237 CDD:280855
PH_RUTBC 310..485 CDD:275431
SRP68-RBD <648..>713 CDD:304552
TBC 947..1124 CDD:214540 41/196 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456620
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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