DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and tbc

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster


Alignment Length:486 Identity:102/486 - (20%)
Similarity:170/486 - (34%) Gaps:140/486 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DHEGYVGREEHTRKLQNLGSEDDLGELPPMMEELSVADGLRPNPGGPFSALTASMWPQEILAKLG 75
            |.|....:::...|:..  ||..|.:...:.|::        |.....||.|||.:      :..
  Fly   774 DEEDNKQKQQQDEKISE--SESKLPDYRKLEEQI--------NQEPSCSASTASSY------ETV 822

  Fly    76 GGAELASGPND------QPEYRFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAHLEFS 134
            |..|:...||.      .|||        :..:|         |.:|..|||.:.....|.....
  Fly   823 GPGEVHQRPNSDTRSVLSPEY--------LSADD---------LQLPDDEDAVRPPPPPAAAAVI 870

  Fly   135 HNKEAAEL-SWEHV------DVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYH 192
            ..|.:.:: :||..      |.|.|..|:.......|:.           ..||.:.:.:..|  
  Fly   871 ITKASVDITNWERSPKAAEGDQMSPLEEQAGESGGAGVN-----------MDALQQPKSACAS-- 922

  Fly   193 DIVKASSNDQLMTSK----------QIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPD 247
               .||||..:.:|:          :||||:.|.......|:|.|   :.:||.::....|...|
  Fly   923 ---PASSNGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANEN---LDKLRNVISTYVWEHLD 981

  Fly   248 IGYCQGTGVIVACLLLFMEEENAFW-----MMATIVEDLLPASYYSSTLLGIQ-ADQRVMHTLIA 306
            :||.||...:||.||:..::|:..:     :|..::|     ::.|...:.:. |:.|.:..::.
  Fly   982 VGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIE-----NFPSGGAMDMHFANMRSLIQILD 1041

  Fly   307 NYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWD--W---FFYEGSIVLFQLTLGM 366
            :.:..:.:|  ..|.........|||..|...:....:...|:  |   ....|..||| |.|.:
  Fly  1042 SEMYDLMDS--NGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF-LALAL 1103

  Fly   367 LKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRHLAYLMADQ 431
            |:.....:  |.||.           :.|||...|.:..|               ||.|..:.  
  Fly  1104 LETYRDII--LSNSM-----------DFTDVIKFFNEMAE---------------RHNAQSVL-- 1138

  Fly   432 GHQIGNPEAAPNLPKQQLARRQVRKSKSILE 462
                            ||||..|.:.:.|:|
  Fly  1139 ----------------QLARSLVLQLQMIIE 1153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 50/234 (21%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 39/173 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456619
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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