DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and CG4041

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_572197.4 Gene:CG4041 / 31422 FlyBaseID:FBgn0029736 Length:819 Species:Drosophila melanogaster


Alignment Length:688 Identity:147/688 - (21%)
Similarity:230/688 - (33%) Gaps:252/688 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HEGYVGREEHTRKLQNLGSEDDLGELP------------PMMEELSVADGLRPNPGGPFSALTA- 63
            ||.||..::..|:|    .|..|..||            |:.||:.:  .|:.....|.|..|. 
  Fly   226 HERYVQMDQRLRQL----LESCLSVLPKRRPLPGELLEHPIFEEVLL--DLKKQKMQPLSPETEH 284

  Fly    64 -------------SMWPQEILAKLGGG---AELASGPNDQPEYRFDEFGFRVEEEDGPEQSSNKL 112
                         .:|      :|.||   |||                    :::|..:|...:
  Fly   285 LPLLLRCPLSQIYHLW------QLAGGDVQAEL--------------------KKEGLIRSEAPI 323

  Fly   113 LSIPFV------------EDAQ---------------QRLQWI---------------AHLEFSH 135
            |.:|.:            ..||               |||..:               ||  |:.
  Fly   324 LGLPQIVRLSGASVCPGRSQAQLMDDRVVPLRLKALLQRLSGLPAAVYFPLLHSPRFPAH--FAR 386

  Fly   136 NKEAAELSWEHVDVMLPRTEKLRNMVR--QGIPHT---------------LRAQMWMRL-----S 178
            ..:...|.....|:.. :.:::|...|  ||.|||               ||..:|..|     :
  Fly   387 ELQELPLVIREKDIEY-QFQRVRLFARLLQGYPHTAEQLQREAAVDVPPLLRGPIWAALLEVVPN 450

  Fly   179 GALAKKQK-SETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIA 242
            |:.||..| :.||              |.:|||.|:.|....:...|:|:|.  .:|||:|:  |
  Fly   451 GSYAKIDKFTSTS--------------TDRQIEVDIPRCHQYDELLSSPDGH--RKLRRLLK--A 497

  Fly   243 WL--FPDIGYCQGTGVIVACLLL--FMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMHT 303
            |:  .|...|.||...:.|..|.  |..||.||..:...:...|...:....           ..
  Fly   498 WVTAHPQYVYWQGLDSLTAPFLYLNFNNEELAFLSLFKFIPKYLQWFFLKDN-----------SA 551

  Fly   304 LIANYLSSVDESLRKHDIELS-----------LITLHWFLTLFANVVHMKILVRIWD-------- 349
            :|..|||...:....|:..|:           |..:.||||:|::|..:..::.:||        
  Fly   552 VIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHVFPLHKILHLWDKLMLGDSS 616

  Fly   350 WFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNS----LSDIPGEVTDVEVLFRQALEVGGS 410
            :..:.|..:|.||...:|             ...||.    .||:|..|.|..||..|.:.....
  Fly   617 YPLFIGIAILRQLRSTLL-------------TSGFNECILLFSDLPDIVMDGCVLESQKMYEATP 668

  Fly   411 LSQTVIDTHRRRHLAYLMADQGHQIGNPEA-APNLPKQQLARRQVRKSKSILEAFLFRGDGNEGD 474
            .|.|     .|:|...|...|...||..:. ..:|.::|..|...:..:.:|:        |...
  Fly   669 KSIT-----HRQHALRLQPPQALDIGVADVELKHLQQEQCPRISAKDVQFLLD--------NSPA 720

  Fly   475 QLKNKNIRQTEILVDLREAILKVGR----HFITI--------------------EPKLAGHIQLT 515
            :|         .|:||| ::::.||    |.|.|                    |.:|.|.|.:.
  Fly   721 EL---------ALIDLR-SVVEFGRVHVPHSINIPFATVQLGEQRLEALQVPQLEAQLRGKIVVC 775

  Fly   516 ANYSTESHAKDHENFI---NVART--RKRRAKALHDFE 548
            .: :...|:.:..:|:   .|.||  ..:....||..|
  Fly   776 VS-NIHQHSVEFSHFLVACGVQRTCILHKGFNVLHSIE 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 63/259 (24%)
SH3_SGSM3 540..592 CDD:212747 3/9 (33%)
RUN 619..773 CDD:280855
CG4041NP_572197.4 PKc_like 45..272 CDD:304357 14/51 (27%)
TBC 432..634 CDD:214540 56/230 (24%)
RHOD_Kc 706..810 CDD:238783 22/122 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456525
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.