DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and Tbc1d9

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_006255308.1 Gene:Tbc1d9 / 304645 RGDID:1308221 Length:1262 Species:Rattus norvegicus


Alignment Length:645 Identity:158/645 - (24%)
Similarity:254/645 - (39%) Gaps:185/645 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SEDDLGELP-------PMMEELSVADGLRP-NPGGPFSALTASMWPQEILAKLGGGAELASGPND 86
            |:|::...|       |.....|.|||.|| |..|. |..||:   |.::..             
  Rat   417 SDDEVYSRPSSLVSSSPQRSTSSDADGERPFNLNGN-SVPTAT---QTLMTM------------- 464

  Fly    87 QPEYRFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAHL-EFSHNKEAAELSWEHVDVM 150
               ||          ...||:.:.||......|.|     |..|. |:...            :.
  Rat   465 ---YR----------RRSPEEFNPKLAKEFLKEQA-----WKIHFAEYGQG------------IC 499

  Fly   151 LPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLR 215
            :.||||.|.:|.:|||..:|.::|:.||||:.:|......|.|:|:.|.....:.:::||:||.|
  Rat   500 MYRTEKTRELVLKGIPERMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHR 564

  Fly   216 ILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVED 280
            .||.:..|.|.  .||..|||:|...|:..|:|||||...::.:.|||:.:||.|||::..:.|.
  Rat   565 SLPEHPAFQNE--MGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCER 627

  Fly   281 LLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILV 345
            :|| .||::.::|...||.|...|..:|:..:.:.::...: :|.|:|.||||||.:|:..:..|
  Rat   628 MLP-DYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGV-ISTISLSWFLTLFLSVMPFESAV 690

  Fly   346 RIWDWFFYEGSIVLFQLTLGMLKVKEQDL--------------KHLENSA----------QIFNS 386
            .:.|.|||||..|:|||.|.:|......|              ::|::..          .:.:.
  Rat   691 VVVDCFFYEGIKVIFQLALAVLDANVDKLLGCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSL 755

  Fly   387 LSDIPGEVTDVEVL----------------------FRQALEVGGSLSQTVIDTHRRRHLAYLMA 429
            |||..|....|::.                      |:|.|:|    .||:.||.:|..:..::.
  Rat   756 LSDDVGPYPAVDIFRLIGTSYEKFGTIRADLIEQMRFKQRLKV----IQTLEDTTKRNVVRTIVT 816

  Fly   430 DQGHQI---------------------GNPEAA----PNLPKQQLARRQVRKSK----------- 458
            :....|                     |:..|.    |:||..:..|....:.|           
  Rat   817 ETSFTIDELEELYALFKAEHLTSCYWGGSSNAPDRHDPSLPYLEQYRIDFEQFKGMFVLLFPWAC 881

  Fly   459 ----SILEAFLFRGDGNEGDQLKN--------------------KNIRQTEIL------VDLREA 493
                .:|.:.||:.....||.|.|                    |.:.:..:|      .|..::
  Rat   882 GTHSDVLASRLFQLLDENGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDS 946

  Fly   494 ILKVGRHFI-TIEPKLAGHIQLTANYSTESHAKD--HENFINVARTRKRRAKALHDFERH 550
            ..:..::|. .|.|:....:.|      :|..|.  .|.|:.|:..:.|..:|.....||
  Rat   947 AFEATQYFFEDITPECTHVVGL------DSRGKQSADEGFVTVSLKQDRGKRANSQENRH 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 80/227 (35%)
SH3_SGSM3 540..592 CDD:212747 3/11 (27%)
RUN 619..773 CDD:280855
Tbc1d9XP_006255308.1 PH-GRAM1_TCB1D9_TCB1D9B 157..255 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 304..399 CDD:270161
TBC 510..720 CDD:214540 79/213 (37%)
EFh <891..921 CDD:298682 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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