DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and gyp3

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_587829.1 Gene:gyp3 / 2539298 PomBaseID:SPCC4G3.09c Length:635 Species:Schizosaccharomyces pombe


Alignment Length:501 Identity:118/501 - (23%)
Similarity:194/501 - (38%) Gaps:99/501 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ELPP-----MMEELSVADGL--RPNPGGPFSALTASMWPQEILAKLGGGAELASGPNDQPEYRFD 93
            |:||     ...|||..:..  .......|||:||:....|..::     :.:|..:....::.:
pombe   143 EIPPTDFLSTSTELSKRESCLSTETSSSKFSAVTAATITNETQSE-----KRSSQTDPSLPFKTN 202

  Fly    94 EFGFRVEEEDGP----------------------EQSSNKLLSIP-----------FVEDAQQRL 125
            .....|..|:||                      .:.:|:..::.           ::|..:|| 
pombe   203 SLNCDVTYEEGPLTKKLRGPKKYKPSHSSWDIYGFKKANQFYTVDQYNTWYGPYSRYLERREQR- 266

  Fly   126 QWIAHLEFSHNKEAAELSWEHVDVMLPRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETS 190
             |...|:    :...:...:...:...|:.|.:..:|:|||...|...|...||.....|::...
pombe   267 -WKLFLQ----ENGIDYIHQSPSIFPSRSAKTQRFIRKGIPPEYRGNAWFYYSGGYELLQRNPKL 326

  Fly   191 YHDIVKASSNDQLMTSKQIEKDLLRILPTNACF------------------SNPNGTGIPRLRRI 237
            |..:.:.:...:...|..||:||.|..|.|..|                  ..|:...|.:|||:
pombe   327 YETLWRCACIKKPSDSDLIERDLYRTFPDNVHFRHKSKHSRNSSDASEHSSEEPDVPMISKLRRV 391

  Fly   238 LRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMH 302
            |...|...|:.||||....:....||||.||.||||:.......|| ..:.:.|.|...||.|: 
pombe   392 LMTFATYLPENGYCQSLNFLAGFFLLFMSEEKAFWMLVITCRKYLP-KMHDANLEGANIDQSVL- 454

  Fly   303 TLIANYLSSVDESLRK--------------HDI-----ELSLITLHWFLTLFANVVHMKILVRIW 348
                  ::||.|||..              :||     .::|:|..||::.|..::..:..:|:|
pombe   455 ------MASVRESLPAVWSRISLNFDGIPVNDIVAKLPPITLVTAAWFMSAFVGILPTETALRVW 513

  Fly   349 DWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQ 413
            |.||||||.|||...|.:|::.|.|:|......::|..:.|:|..:.|...............:.
pombe   514 DCFFYEGSKVLFMTALCILRLGEDDIKSKSEQTEVFQVIQDLPKSLLDANAFLSLCFRRNFRRTP 578

  Fly   414 TVIDTHRRRHLAYLMADQGHQIGNPEAAPNLPKQQLARRQVRKSKS 459
            :..|..|||.   .:|.:.:...:.....:..|..|:|...|.|||
pombe   579 SQKDIERRRE---KVAKKRNSSASKLEMSDSSKHHLSRSSSRFSKS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 76/250 (30%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
gyp3NP_587829.1 COG5210 22..576 CDD:227535 106/451 (24%)
TBC 297..540 CDD:214540 76/250 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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