DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc-6

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001021909.1 Gene:tbc-6 / 182185 WormBaseID:WBGene00015410 Length:330 Species:Caenorhabditis elegans


Alignment Length:307 Identity:81/307 - (26%)
Similarity:141/307 - (45%) Gaps:45/307 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DEFGF----RVEEEDGPEQSSNKLLS--IPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHVDVML 151
            |:.||    ..:||.|.::......|  :|.|  .::|.:|        .||.            
 Worm    21 DDLGFLRPWSPQEESGCKKQYEAWYSSYLPIV--VRRRCRW--------EKEN------------ 63

  Fly   152 PR--TEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLL 214
            ||  :..|:..||:|||||.|.::|:|   :...:.......|::     .|:::  |||:.||.
 Worm    64 PRRNSHLLQRFVRKGIPHTFRKELWLR---SCPSRADGVWQRHEV-----PDEVI--KQIKLDLP 118

  Fly   215 RILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEEN-AFWMMATIV 278
            |..|.|. |....||. ..|.|.|..:|...|.:|||||...:...:||.:.:|: |..::..:|
 Worm   119 RTFPDNK-FLKTEGTR-KTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDESRAIDLLVHLV 181

  Fly   279 EDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKI 343
            ..  ...||...::|::.|..|:|:|:..:...|..:|.|.|:.|.::...||:..|...:.|:.
 Worm   182 SQ--RQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVESLPMET 244

  Fly   344 LVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDI 390
            ::|:||...|||...||::.:.:.:.....:...|:..|:...:.:|
 Worm   245 VLRLWDCLIYEGDEWLFRIAVALFRSNMIAISSCESIDQLMTEVQNI 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 62/214 (29%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc-6NP_001021909.1 RabGAP-TBC 99..272 CDD:278964 52/183 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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