DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12241 and tbc-2

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_495156.1 Gene:tbc-2 / 173986 WormBaseID:WBGene00022880 Length:908 Species:Caenorhabditis elegans


Alignment Length:485 Identity:122/485 - (25%)
Similarity:207/485 - (42%) Gaps:88/485 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEHTRKLQNLGSEDDLGELPPMMEELSVADGLRPNPGGPFSALTASMWPQE-------------- 69
            ||.|||:.:..:..|:|||..::|.....:...........|:|.|:..:|              
 Worm   440 EEATRKVLDEENVRDIGELQDLVEGYRTQNQFLNAEIVQLHAITQSLEDREKKLIRQNFDLEACY 504

  Fly    70 ---------------------------ILAKLGGGAELASGPNDQPEYRFDEFGFRVEEEDGPEQ 107
                                       :|.:|  ..|.|..|.:..:...|:.||  .::|...:
 Worm   505 YQLKSRYLMVLNHFKSPTKPGKIMEPGVLKEL--LEESARTPRESQQNLTDQLGF--YKKDDFSE 565

  Fly   108 SSNKLLSIPF-------------VEDAQQRLQWIAHLEFSHNKEAAELSWEHV--------DVML 151
            |.:.|.:..|             :|.:::.::|:.             ||:..        ...:
 Worm   566 SDDLLDTATFYMKKAGDVVEATKLEQSEEYMKWLQ-------------SWDAFLVNNTVSRQTAI 617

  Fly   152 PRTEKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETS---YHDIVKASSNDQLMTS-----KQ 208
            ..:..|:.::|.|:|...|.::|..:.....|.:::|..   |..:::.:...:...|     ||
 Worm   618 MSSPDLKTLIRTGVPPAYRGRVWKIIVTHWVKDKQAELGNGYYQSMLRKAGTKKQDGSYDAAIKQ 682

  Fly   209 IEKDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWM 273
            |:.||.|.||||..|..|:...|.:||.:|....:....:|||||...:.|..||.::|:::||.
 Worm   683 IDLDLARTLPTNKLFDEPDSANIEKLRNVLYAFRYHNSHVGYCQGLNRLAAIALLNLDEQDSFWF 747

  Fly   274 MATIVEDLLPASYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANV 338
            :...||.|.|..||:|:|:|..|||:|:..|:|..|..:...||..:::|||..|.||||.|.:|
 Worm   748 LVACVEHLQPEGYYTSSLIGAVADQKVLRDLVAEKLPKLAAHLRALEVDLSLFALSWFLTCFVDV 812

  Fly   339 VHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNSLSDIPGEVTDVEVLFRQ 403
            :...|.:.|:|.|.|||:.|||:..|.:.|:.|..:...:....:...||.....:.|.:.|.:.
 Worm   813 LPHSIYLTIFDAFLYEGNKVLFRFALALFKICEPHVLQCKTIGTVHQCLSKAQEHIIDFKSLAQV 877

  Fly   404 ALEVGGSLSQTVIDTHRRRHLAYLMADQGH 433
            |........|..|:|.|:.:|..| .|.||
 Worm   878 AFNELNPFPQKTIETKRQLYLTQL-KDTGH 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 77/221 (35%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc-2NP_495156.1 PH_TBC1D2A 20..119 CDD:269966
PH 20..111 CDD:278594
ATG16 235..400 CDD:285778
DUF1664 <289..368 CDD:285172
TBC 627..849 CDD:214540 77/221 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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