DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d10b

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_002940627.3 Gene:tbc1d10b / 100493619 XenbaseID:XB-GENE-940041 Length:1337 Species:Xenopus tropicalis


Alignment Length:571 Identity:136/571 - (23%)
Similarity:226/571 - (39%) Gaps:97/571 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PMMEELSVADGLRPNPGGPFSALTASMWPQEILAKLGGGAELASGPNDQPEYRFDEFGFRVEEED 103
            |..:.||..|.:     ...|....|:...:..:.||..:|:    |..|..:.|::||.     
 Frog   784 PAPDTLSYLDSV-----SLMSGTLESLTLMDDASSLGSDSEI----NGIPYRKTDKYGFL----- 834

  Fly   104 GPEQSSNKLLSIPFVEDAQQR-LQWIAHLEFSHNKEAAELSWEHVDVMLPRT-EKLRNMVRQGIP 166
            |..|.|........||.::|| |:|:.  .|||        |   |..|.|. :|::...|:|||
 Frog   835 GGNQYSGNGEGFLSVEISRQRELKWLD--MFSH--------W---DKWLSRRFQKVKLRCRKGIP 886

  Fly   167 HTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGI 231
            .:|||:.|..||.:....:|:...:.::.:...:.:.:  ..|||||.|..|.:..|:...|.|.
 Frog   887 SSLRAKAWQLLSNSEELLRKNPGKFEEMERQPGDPKWL--DVIEKDLHRQFPFHEMFAARGGHGQ 949

  Fly   232 PRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQA 296
            ..|.|||:......|:.||||....:.|.||:.|..|.|||.:..|.:..|| .|||:.|..||.
 Frog   950 QDLYRILKAYTVYRPEEGYCQAQAPVAAVLLMHMPAEQAFWCLVQICDKYLP-GYYSAGLEAIQL 1013

  Fly   297 DQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFYEGSIVLFQ 361
            |..:...|:..........|:|..|:..|....||:.:|:..:....::|:||.||.||..::|:
 Frog  1014 DGEIFFALLRRVCPMAYRHLKKFKIDPILYMTEWFMCIFSRTLPWASVLRVWDMFFCEGIKIVFR 1078

  Fly   362 LTLGMLK---VKEQDLKHLENSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRH 423
            :.|.:||   .....|:..:...:....|..:|.:..:.:.|..:...:  .::..:|:......
 Frog  1079 VGLVLLKHTLGSVDKLRSCQGMYETMEKLRSLPPQYMNEDFLLPEISSL--PITDVLIERESTTQ 1141

  Fly   424 LAYLMADQGHQIGNPEAAPNLPKQQLARRQVRKSKSILEAFLFRGDGNEGDQLKNKNIRQ----- 483
            |.....::|.....|.      ::....||:.:.|..|...|      .|.:|...::|:     
 Frog  1142 LRKWRENRGELQYRPS------RRLHGARQIHEEKVRLNPSL------SGSRLSLSSLRRPSPPP 1194

  Fly   484 -TEILVD-------LREAI-LKVGRHFITIEPKLAGHIQLTANYSTESHAKDHENFINVARTRKR 539
             |.:|.:       ||.|: .........:.||.:|  :.|.....|...|:.|   ...|.|||
 Frog  1195 TTALLPESVVVSEGLRPALPSPTSNKTPLVPPKESG--KRTKEKQREQEKKEKE---EKERERKR 1254

  Fly   540 -----------------------------RAKALHDFERHDDDELGFRRND 561
                                         :.|...|.::..:.:..|||.|
 Frog  1255 EKEEKQKEKEREKLREREEKQREKERRAQKEKEKADGKQKKERKFSFRRKD 1305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 67/216 (31%)
SH3_SGSM3 540..592 CDD:212747 6/22 (27%)
RUN 619..773 CDD:280855
tbc1d10bXP_002940627.3 PSII_BNR 155..471 CDD:421885
PLN03131 <505..>698 CDD:178677
TBC 881..1086 CDD:214540 66/207 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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