DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d12b

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:XP_005169505.1 Gene:tbc1d12b / 100332088 ZFINID:ZDB-GENE-121214-108 Length:771 Species:Danio rerio


Alignment Length:452 Identity:103/452 - (22%)
Similarity:175/452 - (38%) Gaps:96/452 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ARSIFGRDHEGYVGREEHTRKLQNLGSEDDLGELPPMMEELSVADGLRPNPGGPFSALTASMWPQ 68
            :||:|.|..     ||..:.....|..:..|.|.||...:....:.   |||...|..|.::...
Zfish   303 SRSLFTRKQ-----REAQSAPGWKLFGKVPLRESPPKDSKTIQQES---NPGNLTSVSTPNLLSS 359

  Fly    69 -EILAKLGGGAELASGP--------------------NDQP--------------EYRFDEFGFR 98
             |..||:....:..|.|                    .|:|              ...:||....
Zfish   360 GEYEAKVCKSGQSPSLPAQSRRKNLEFEPLSTTALILEDRPANLPAKSEEEAQRHRQEYDEMVAE 424

  Fly    99 VEEEDGPE-QSSNKLLSIPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHVDVMLPRTEKLRNMVR 162
            .::.:..| |...|.:...|.::     :.||:.....|.|... :||    .:..|.::|::..
Zfish   425 AKKRELKEAQKKKKQMKERFKQE-----ESIANAMVVWNTEILP-NWE----SMRGTRRVRDLWW 479

  Fly   163 QGIPHTLRAQMWMRLSG--------------ALAKKQ-KS--ETSYHDIVKASSNDQLMTSKQIE 210
            ||:|..:|.::|....|              :.||:: ||  ||.........|.|:..:...|:
Zfish   480 QGLPPNVRGKVWSLAVGNELNITSDLYEIFLSRAKERWKSFRETGSEIESDVDSADRESSLDLIK 544

  Fly   211 KDLLRILPTNACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMA 275
            .|:.|..|:...|.. .|.....|..:|.......||:||.||...|.|.|:|.:||.:||...|
Zfish   545 LDISRTFPSLFIFQK-GGPYHDLLHSVLGAYTCYRPDVGYVQGMSFIAAVLILNLEEADAFIAFA 608

  Fly   276 TIVEDLLPASYYSSTLLGIQADQRVMHTLIANYLSS----VDESL-------RKHDIELSLITLH 329
            .::......:::           ||.|.|:..|.::    .:|:|       :.:::...|..:.
Zfish   609 NLLNKPCQMAFF-----------RVDHELMLKYFAAFEVFFEENLPRLFNHFKSYNLTPDLYLID 662

  Fly   330 WFLTLFANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVKEQDLKHLE--NSAQIFNSLSD 389
            |..||:|..:.:.:..|:||.|..:|...||:..||:|::.|:.|..::  :|||....|.|
Zfish   663 WIFTLYAKSLPLDVACRVWDVFCRDGEEFLFRTGLGILRLYEELLLQMDFIHSAQFLTRLPD 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 60/241 (25%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc1d12bXP_005169505.1 TPX2 407..>451 CDD:284337 6/48 (13%)
TBC 478..708 CDD:214540 60/241 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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