DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and sgsm3

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001123837.1 Gene:sgsm3 / 100170594 XenbaseID:XB-GENE-965522 Length:753 Species:Xenopus tropicalis


Alignment Length:760 Identity:500/760 - (65%)
Similarity:628/760 - (82%) Gaps:10/760 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VADGLRPNPGGPFSALTASMWPQEILAKLGGGAELASGPNDQPEYRFDEFGFRVEEEDGPEQSSN 110
            ::.|..|:|||.|||||||||||:||||.....:..    :|||:|:|||||||::|||.|.:|:
 Frog     1 MSGGYTPSPGGSFSALTASMWPQDILAKYTQKEQSV----EQPEFRYDEFGFRVDKEDGAEPNSS 61

  Fly   111 KLLSIPFVEDAQQRLQWIAHLEFSHNKEAAELSWEHVDVMLPRTEKLRNMVRQGIPHTLRAQMWM 175
            |||.||..||.||||:|.|||||:||.:..:|:|:.:||.||.::|||::|..||||::|.|:||
 Frog    62 KLLGIPLTEDPQQRLRWQAHLEFTHNHDVGDLTWDKIDVTLPHSDKLRSLVLAGIPHSMRPQLWM 126

  Fly   176 RLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRG 240
            ||||||.|||.||.:|.|||:.||||..:.:|||||||||.:|:||||||....|:|||||:|||
 Frog   127 RLSGALQKKQNSEMTYKDIVRNSSNDDTLAAKQIEKDLLRTMPSNACFSNLQSVGVPRLRRVLRG 191

  Fly   241 IAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMHTLI 305
            :|||:||||||||||::.||||||:|||:||||||.|||||:|.||:::||:|:|.||||:..||
 Frog   192 LAWLYPDIGYCQGTGMVAACLLLFLEEEDAFWMMAAIVEDLVPVSYFNTTLVGVQTDQRVLRHLI 256

  Fly   306 ANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWDWFFYEGSIVLFQLTLGMLKVK 370
            ..||..:|:.|::|||||||||||||||.||:|||:|:|:||||:|||:||:||||.||||||:|
 Frog   257 VQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVHIKLLLRIWDFFFYQGSLVLFQTTLGMLKMK 321

  Fly   371 EQDLKHLENSAQIFNSLSDIPGEVTDVEVLFRQALEVGGSLSQTVIDTHRRRHLAYLMADQGHQI 435
            |::|...||||.|||:|||||.::.:.:||.|:|:.:.|:|::.:|:..||:|||||:||||..:
 Frog   322 EEELIQSENSASIFNTLSDIPSQIEEADVLLREAMLISGTLTEVMIEAQRRKHLAYLIADQGQLL 386

  Fly   436 GNPEAAPNLPKQQLARRQVRKSKSILEAFLFRGDGNEGDQLKNKNIRQTEILVDLREAILKVGRH 500
            .:..|..||.|  :.|||.::.||.:...||..|..|.  ||:|||:||.::.|||||||:|.||
 Frog   387 NSTAAVTNLSK--IIRRQSQRRKSGITTLLFGDDDFEA--LKSKNIKQTALVADLREAILQVARH 447

  Fly   501 FITIEPKLAGHIQLTANYSTESHAKDHENFINVARTRKRRAKALHDFERHDDDELGFRRNDIITI 565
            |...:||... |.||.:|:.|||.:||||:::.:|:|:||||||.|||||||||||||:||||||
 Frog   448 FQCTDPKNCS-IDLTPDYTMESHQRDHENYVSCSRSRRRRAKALLDFERHDDDELGFRKNDIITI 511

  Fly   566 ISQKDEHCWVGELNGLRGWFPAKFVELLDERSKLYTSAGDDAISETVTDLVRGTLAPAIKAFLEH 630
            ||||||||||||||||||||||||||:||||||.|:.||||:::|.:||||||||.|:||:..||
 Frog   512 ISQKDEHCWVGELNGLRGWFPAKFVEILDERSKEYSVAGDDSVTEGITDLVRGTLCPSIKSIFEH 576

  Fly   631 GMKRPTFLGGPIHPWLYIEEAATREVEKDFESVYSRLVLCKTYRLDEDGKVLTPEELLYRCVQAI 695
            |:|:|:.||||.||||:|||||:||||:||:|||||||||||||||||||||||||||||.||::
 Frog   577 GLKKPSLLGGPCHPWLFIEEAASREVERDFDSVYSRLVLCKTYRLDEDGKVLTPEELLYRGVQSV 641

  Fly   696 NQTHDDAHAQMDVKLRSLICLGLNEQVLHLWLEVLCACQEVVQKWYHSWSFIDSPGWVQIKCELR 760
            |.:||.||||||||||||||:|||||||||||||||:....|:|||..|||:.||||||||||||
 Frog   642 NVSHDAAHAQMDVKLRSLICIGLNEQVLHLWLEVLCSSLPTVEKWYQPWSFLRSPGWVQIKCELR 706

  Fly   761 ILSQFAFNLNPDWELPPKR-GKESQPLKDGVRDMLVKHHLFSWDL 804
            :||:|||:|:||||||.|| .||.:|||:||:||||||||||||:
 Frog   707 VLSRFAFSLSPDWELPVKREDKEKKPLKEGVQDMLVKHHLFSWDI 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 146/213 (69%)
SH3_SGSM3 540..592 CDD:212747 49/51 (96%)
RUN 619..773 CDD:280855 118/153 (77%)
sgsm3NP_001123837.1 TBC 115..326 CDD:214540 145/210 (69%)
SH3_SGSM3 486..538 CDD:212747 49/51 (96%)
RUN 565..716 CDD:367169 116/150 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 311 1.000 Domainoid score I1301
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9249
Inparanoid 1 1.050 1051 1.000 Inparanoid score I257
OMA 1 1.010 - - QHG48054
OrthoDB 1 1.010 - - D1162786at2759
OrthoFinder 1 1.000 - - FOG0007050
OrthoInspector 1 1.000 - - oto103217
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 1 1.000 - - X5135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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