DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12241 and tbc1d9b

DIOPT Version :9

Sequence 1:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster
Sequence 2:NP_001107313.1 Gene:tbc1d9b / 100135104 XenbaseID:XB-GENE-989754 Length:1259 Species:Xenopus tropicalis


Alignment Length:552 Identity:135/552 - (24%)
Similarity:224/552 - (40%) Gaps:138/552 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QNLGSEDDLGELPPMMEELSVADGLRPNPGGPFSALTASMWPQEILAKLGGGAELASGPNDQPEY 90
            ||.|.|:.....|....::|.......|.|.  .|.|||    ..|.||                
 Frog   416 QNNGCEEATNPSPSSSTDVSPTFSTPQNNGS--DAPTAS----HGLLKL---------------- 458

  Fly    91 RFDEFGFRVEEEDGPEQSSNKLLSIPFVEDAQQRLQWIAH-LEFSHNKEAAELSWEHVDVMLPRT 154
                |...:.|:..|:....|:          :...|..| ||:...            :.:.||
 Frog   459 ----FQREITEDMKPKWDKEKM----------KEESWNIHFLEYGRG------------MCMYRT 497

  Fly   155 EKLRNMVRQGIPHTLRAQMWMRLSGALAKKQKSETSYHDIVKASSNDQLMTSKQIEKDLLRILPT 219
            .|.|.:|.:|||..||.::|:..|||..:.......|.|:|:.|.....:.:.:||:||.|.:|.
 Frog   498 SKTRELVLKGIPENLRGELWLLFSGASNEMVTHPGYYADLVEKSMGRCNLATDEIERDLHRSMPE 562

  Fly   220 NACFSNPNGTGIPRLRRILRGIAWLFPDIGYCQGTGVIVACLLLFMEEENAFWMMATIVEDLLPA 284
            :..|.|.  .||..|||:|...|:..|:|||||...::.:.|||:..||.|||::.::.|.:|| 
 Frog   563 HPAFQNE--LGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYCNEEEAFWLLVSLCEHMLP- 624

  Fly   285 SYYSSTLLGIQADQRVMHTLIANYLSSVDESLRKHDIELSLITLHWFLTLFANVVHMKILVRIWD 349
            .||::.::|...||.|...|...||..:.|.:::..: :|.|:|.||||||.:|:..:..|.:.|
 Frog   625 DYYNTRVVGALVDQGVFEELTRLYLPQLSEKMQELGV-ISTISLSWFLTLFLSVMPFESAVVVVD 688

  Fly   350 WFFYEGSIVLFQLTLGMLKVKEQDL--------------KHLENSAQIFNSLS------------ 388
            .||:||..::.||:|.:|:...:.|              ::|:|   :.|..|            
 Frog   689 CFFFEGIKLILQLSLAVLEANMESLMNCMDEGEAMTILGRYLDN---VLNKQSVSPPIPHLHALL 750

  Fly   389 ----DIPGEV------------------TDVEVL-FRQALEVGGSLSQTVIDTHRRRHLAYLMAD 430
                :.|.||                  .|:|.: |:|.|:|    .|::.||.:|..:..:..|
 Frog   751 TIGDEPPPEVDIFELIEASYEKFSALRSDDIEQMRFKQRLKV----IQSLEDTAKRSIVRAISTD 811

  Fly   431 QGHQI---------------------GNPEAA----PNLPKQQLARRQVRKSKSILEAFLFRGDG 470
            .|..:                     ||..:.    |:||..:..|..:::.:.:.........|
 Frog   812 LGFSMEELEDLYVLFKAQHLMNCYWGGNRTSGSRHDPSLPYLEQYRIDLQQFQELFNQLTPWSCG 876

  Fly   471 NEGDQLKNKNIR----QTEILVDLREAILKVG 498
            .....|..:..|    ..:.|::.:|.:..:|
 Frog   877 QHAPILATRIFRLLDSNKDSLINFKEFVTGLG 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12241NP_650432.1 TBC 161..375 CDD:214540 77/227 (34%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
tbc1d9bNP_001107313.1 PH-GRAM1_TCB1D9_TCB1D9B 154..251 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 299..394 CDD:270161
TBC 504..714 CDD:214540 76/213 (36%)
EFh <854..905 CDD:298682 6/50 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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