DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SIDL and CLUB

DIOPT Version :9

Sequence 1:NP_650431.1 Gene:SIDL / 41833 FlyBaseID:FBgn0038303 Length:1145 Species:Drosophila melanogaster
Sequence 2:NP_200255.5 Gene:CLUB / 835532 AraportID:AT5G54440 Length:1259 Species:Arabidopsis thaliana


Alignment Length:1350 Identity:272/1350 - (20%)
Similarity:459/1350 - (34%) Gaps:436/1350 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TKHVRLEAQAQQFNVAALEKYKQGDWSILEHPILHIFVTECNDVDTYKATIREAIDIWLKTLTSY 106
            |...||.::..|      |:|.  .|  ...|...|.:..|.|:|.:|..::..    ||.:...
plant    67 TTDARLRSRFPQ------EQYL--FW--FREPYATIVLVTCEDLDEFKNILKPR----LKLIVQN 117

  Fly   107 GVSDWMILLVETL---DMRKTKNFMPRTTVLDKIRLDFGTKNDDRC--ISVLNP-----AKFEQK 161
            ...:|.|:.|...   :.:.|||.   ..|..|:.:||.:|..:||  :.|..|     ...|.|
plant   118 DEREWFIVFVSKAHPSNDQATKNV---KKVYAKLEVDFSSKKRERCCKLDVHGPEGNFWEDLELK 179

  Fly   162 STESFR-CLVQRIRFLMLTSYNRNIVKYEELIRSKREKRNIEGWDFRQYFFMQEDLALIFEKLEL 225
            .||..| .|.:|.:|            ||:.||...|:|.:..|:|..:|.::|.||.|||...|
plant   180 ITECIRNTLDRRAQF------------YEDEIRKLSEQRFMPIWNFCNFFILKESLAFIFEMAHL 232

  Fly   226 PTEALIQYDELDAMFSQFITHTGLNEKQQWLNHFRKPLDAFHGICLTRADKFEMRNKIRDEGVSL 290
            ..:||.:||||:..:.:.:...|   ||:....|....|  ..:.|....| .:...::|:....
plant   233 HEDALREYDELELCYLETVNMPG---KQRDFGGFDGEDD--QAVLLKPGSK-PLTQIVQDDSFRE 291

  Fly   291 LEFRNYLFERQAYLLLTCNDIPEIAKRLLNFLFSTLREVELIKLECQEGAL--C---CWEFVCAL 350
            .|||.|||..|:.||...|...|:|.|..:|:.|..:.:.|     .|..|  |   .|.....|
plant   292 FEFRQYLFACQSRLLFKLNRPFEVASRGYSFVISFAKALTL-----HESVLPFCMREVWVITACL 351

  Fly   351 EVLQLC-----EQAMEPN-ELTCFQHCAPIWNLAKDKLYELGKLCG----------------LLP 393
            .:::..     :..:.|: |...|:....:::|::.|...||.|.|                :||
plant   352 ALIEATASHHHDGVVAPDIEKEFFRLQGDLYSLSRVKFMRLGYLIGYGTDIEKSPLNSACLSMLP 416

  Fly   394 GCTP------------------------TSEQLHIVVQ---------------------LS---- 409
            ...|                        ||...|..:|                     ||    
plant   417 WPKPAVWPSLPQDASSEVLEKEKTILQATSRTKHFGIQRKALPLEPSVLLRVANRRRASLSTGNI 481

  Fly   410 -------------SGIGDAPSEQHQF-LQATPQLRD-------RSPNRKPKK-----SGAE---- 444
                         ||:..:|...... :||.|..|.       .||..:|.:     ..||    
plant   482 PEMFDGRPSFTEGSGLEASPRTPSSLKVQAPPMSRTNSSPGNFESPLDRPMRLAEIFVAAEHALR 546

  Fly   445 ------QLKEALGSNQAFQKLYLEL---------------------AELAISTYKHVTRLRSARL 482
                  .|.:.|.|.|.|:..||.|                     .|:|...:||         
plant   547 LTISDHDLLKTLSSIQDFENKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCFKH--------- 602

  Fly   483 VGLDLGNFYCALNEPHKAVGFFTDLLRELKAENWHMLSSQTLLELANCYRKMGDSLAYTKTCSSI 547
                 |.:..|.|...|....:.       .|.|..|.::.|..||.|.:.:.|...|..:|   
plant   603 -----GKYDLAANSYEKVCALYA-------GEGWQDLLAEVLPNLAQCQKILDDQAGYMSSC--- 652

  Fly   548 SCCAELETLVRTFYFDEFLKSLKTLKTTLSAQPSIENANYCVLEDHFRILDIEVVNQKPIIQDDY 612
                     ||....|:.|.|.|..:...|...::.::              |:.|..|      
plant   653 ---------VRLLSLDKGLFSSKERQAFQSEVVTLAHS--------------EMKNPVP------ 688

  Fly   613 ILVQLKVESLYP-RGVVAENVKLCYELEASSLELAM-----ENVSLTASPSTVKAKDTSSRLKVS 671
                |.|.||.. .|.....::|| :.:..:|.:.:     ::::|.:...|:.|.:.:.     
plant   689 ----LDVSSLITFSGNTGPPLQLC-DGDPGNLSVTVWSGFPDDITLDSLSLTLVATNNTD----- 743

  Fly   672 LQLVYKQDNRLHSAAVACDLPKSKQPVRRTSSTKRKLSPSVQADFTNFVQAENIALQPGVNLIEM 736
                                 :..|.::.:::|                     .|.||.|.|..
plant   744 ---------------------EGGQALKSSAAT---------------------VLNPGRNTITF 766

  Fly   737 KAKATRVGCW------------QFKQLCIS----MSSLEFLSEQLPFMP--------ATFEISTK 777
            .....:.|.:            :|:....|    ..|.:|:|.:.|..|        |..:::..
plant   767 ALPPQKPGSYVLGVVTGQIGRLRFRSHSFSKGGPADSDDFMSYEKPTRPILKVSKPRALVDLAAA 831

  Fly   778 PASATLEFKTLIAG-IVQPISLNVSGG----------------------------------SFIF 807
            .:||.|..:....| ||:||:.::.|.                                  :.:|
plant   832 VSSALLINEAQWIGIIVRPIAYSLKGAILHIDTGPGLKIEDSYGIEMERYMDADCDTGASKAEVF 896

  Fly   808 PPDAKI-TLRCSKNLRIRQARNTDDEAAYND-DQSFESTLQVPLVQFKSFEERR-------IPL- 862
            ..|:.: :.|.|:.|.:     .|.:..::| ..:..|.|.||:   ::..|:.       .|| 
plant   897 VEDSPVSSKRDSEVLNL-----CDGKIVFSDWASNVSSILWVPV---RALSEKLARGSSSVTPLK 953

  Fly   863 -EVLTDMPGRKVSKHHEHHIALNCPWSRTELPIAVDFQPAMEATCRL-HTC--GTQKFLQVIMKG 923
             ::|..|  |.|:...|..:..|..:.||   ||..|....:.|.|: :.|  || ..|||::  
plant   954 QDILEGM--RTVALKLEFGVHHNQIFERT---IAAHFTDPFDVTTRVANKCNDGT-LVLQVML-- 1010

  Fly   924 MEAHLLLQHAQVKCDVPGVQLLDL------NPESQQPIEIYKSLTVT------YLYEIQVEPLKT 976
               |.|::...:..||    .|||      .....:|...:..|.|:      .::.|.::...:
plant  1011 ---HSLVKANLIVLDV----WLDLQDGFIHGQNDGRPTSTFFPLVVSPGSRAAVVFSICLDKSMS 1068

  Fly   977 EH----ELP--VVKVHFVI---KYASLSQP---DVWRTYGCAFDLVDYTTLFKLQAQLE------ 1023
            ..    :||  ::.:.:.|   :.|...:|   |...|.....|||..:.:...:..|:      
plant  1069 SEGKDLQLPESILNIKYGIHGDRAAGAHRPVDADHSETDTEGRDLVFKSAIVLQRPVLDPCLTVG 1133

  Fly  1024 ----PNELCRLRTVCNM--------NLKITKVHENPYTDLMYEVLNDQNLWAVCGRSAGVVSMKD 1076
                |::..|:..:..|        .||.::..|..:.:::|||..:...|.:.||..|.||:.:
plant  1134 FLPLPSDGLRVGKLITMQWRVERLKELKESEAVEQQHDEVLYEVNANSENWMIAGRKRGHVSLSE 1198

  Fly  1077 VDSHSISLDVM--PLSTGFLPMPSIRLSKY-TAGGKSKTDGHSKVHPFPP 1123
            .....:.:.::  ||..|::..|.:.|... .|...|...|...|...||
plant  1199 EQGSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPSGPHLVCVLPP 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIDLNP_650431.1 TRAPPC10 978..1138 CDD:289361 36/178 (20%)
CLUBNP_200255.5 TRAPPC10 1124..>1241 CDD:289361 24/116 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1931
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 151 1.000 Inparanoid score I1708
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D537782at2759
OrthoFinder 1 1.000 - - FOG0003974
OrthoInspector 1 1.000 - - oto4144
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13251
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

Return to query results.
Submit another query.