DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SIDL and trappc10

DIOPT Version :9

Sequence 1:NP_650431.1 Gene:SIDL / 41833 FlyBaseID:FBgn0038303 Length:1145 Species:Drosophila melanogaster
Sequence 2:XP_002941022.2 Gene:trappc10 / 100489172 XenbaseID:XB-GENE-995093 Length:1256 Species:Xenopus tropicalis


Alignment Length:1283 Identity:365/1283 - (28%)
Similarity:602/1283 - (46%) Gaps:202/1283 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKPIITYSGSCPLFRSLESQILNAIPLDTCEWRRTFQRPTKHVRLEAQAQQFNVAALEKYKQG 65
            |:.|||:|::|...:|.::...:...:|.:..||||.:.|..|.:.||:...||....|.  |:|
 Frog    22 MENKPIVTWAGDQNVFYAVFPILTQQLPREPMEWRRAYGRAPKMIHLESHFVQFKEELLP--KEG 84

  Fly    66 DWSILEHPILHIFVTECNDVDTYKATIREAIDIWLKTLTSYGVSDWMILLVETLDMRKTK-NFMP 129
            :.::|..|.|||:.|:|.|.:.|||..::.|..|...|.::..:||:|::||:...:|.| |.:|
 Frog    85 NKALLTFPFLHIYWTDCCDTEVYKAATKDDITKWQNALRAHSTTDWLIVVVESEAKKKNKTNILP 149

  Fly   130 RTTVLDKIRLDFGTKNDDRCISVLNPAKFEQKSTESFRCLVQRIRFLMLTSYNRNIVKYEELIRS 194
            ||::.||||.||..|..|||:.:::|.|...:|.||:...:.::|.|:|||:.||:..:|:.:|:
 Frog   150 RTSIADKIRSDFCNKQSDRCMVLVDPLKDTSRSQESWSLFLAKLRTLLLTSFTRNLGHFEDEMRT 214

  Fly   195 KREKRNIEGWDFRQYFFMQEDLALIFEKLELPTEALIQYDELDAMFSQFITHTGLNEKQQWLNHF 259
            .||||...||.|..||.:||:||.:||.|:...:||:|||||||:|||::.:.|..:...||:.|
 Frog   215 LREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDALVQYDELDALFSQYVLNFGAGDGANWLSSF 279

  Fly   260 RKPLDAFHGICLTRADKFEMRNKIRDEGVSLLEFRNYLFERQAYLLLTCNDIPEIAKRLLNFLFS 324
            .:|:.::.|:.|.:....|.|:.|:....:|||.|:|||.||..|||......|:|.|.|..|.:
 Frog   280 CQPVRSWDGLALRKPIDMEKRDLIQRRQANLLELRSYLFSRQCTLLLFLQRPWEVANRALELLHN 344

  Fly   325 TLREVELIKLECQEGALCCWEFVCALEVLQ----LCEQA-MEPNELTCFQHCAPIWNLAKDKLYE 384
            .::|::|:::....|||.||.|:..|||||    .||:| :|.|  .|  |...:|:.|.:||..
 Frog   345 CVQELKLLEVSVPPGALDCWVFLSCLEVLQRIEGCCERAQIEAN--VC--HTVGLWSYATEKLQS 405

  Fly   385 LGKLCGLLPGCTPTSEQLHIVVQLSSGIGDAPSEQHQFLQATPQLRDRSPNRKPKKSGAEQLKEA 449
            ||.||||:....|.||.|...|.|.:|:|                .:|:.......|..::|:||
 Frog   406 LGSLCGLVCEKGPCSEDLQRTVDLLAGLG----------------AERAETANTAHSPYKKLQEA 454

  Fly   450 LGSNQAFQKLYLELAELAISTYKHVTRLRSARLVGLDLGNFYCALNEPHKAVGFFTDLLRELKAE 514
            |.|.:||:|.||||....|..|..:.|.|||:|||.||.:||...:.|.||..|....|...::|
 Frog   455 LSSEEAFEKHYLELCHATIEMYNSIGRSRSAKLVGKDLADFYMKKSCPQKAEPFLQSALSMYQSE 519

  Fly   515 NWHMLSSQTLLELANCYRKMGDSLAYTKTCSSISCCAELETLVRTFYFDEFLK----------SL 569
            .|.:..:.|..:||.|.|::|.:..|.:|||.::....|....|..:..|.||          ||
 Frog   520 GWELPLTHTRKQLAECQRQLGQTEPYLRTCSLLAADVNLSQEERQLFCQEILKFAAKNSGSTESL 584

  Fly   570 KTLK-------TTLSAQPSIENANYCVLEDHFRILDIEVVNQKPIIQDDYILVQLKVESLYPRGV 627
            ..|.       |:||.:|  .||               ||:     ....:.::|.:.||.|..:
 Frog   585 VCLPLGSFAQLTSLSFEP--PNA---------------VVH-----VGGSLTMELTLLSLMPEPL 627

  Fly   628 VAENVK--LCYELEASSLELAME---------NVSLTASPSTVKAKDTSSRLKVS-LQLVYKQDN 680
            ..:::.  ..|.|:.:|.....|         ......:...:.|:.||...::| :......:.
 Frog   628 QLDHISGHFHYNLDRNSYRKTAEWLTRHKPASGTIFFQAEGPLGARGTSPTPELSEMHEKSPSEG 692

  Fly   681 RLHSAAVACD------LPKSKQPVRRTSSTKRKLSPSVQADFTNFVQAENIALQPGVNLIEMKAK 739
            .|.||.|.|.      .|...|   .:||..|:.|.:|: :..|.::..|:.||||:|.:....:
 Frog   693 GLVSAGVICRNVHVLLRPPDSQ---SSSSLDRQTSVTVK-EGANTLKCHNVTLQPGLNHLTFHTQ 753

  Fly   740 ATRVGCWQFKQLCISMSSLEFLSEQLP--FMPATFEISTKPASATLE--FKTLIAGIVQPISLNV 800
            |...|.:..:||..|:..::.   :||  :....:::.|:.....:|  .:.|:|||.|.:...|
 Frog   754 AQESGTYTLRQLVASIGEVQL---KLPHIYPIVQYDVYTQDPQLKVEPQSECLLAGIPQSVKFTV 815

  Fly   801 SGGSFIFPPDAKITLRCSKNLRIRQA--------RNTDDEAAYN--DDQSFESTLQVPLVQFKSF 855
            :.|.:.......:.|..::::.|...        ||:..||:..  ..|..|....:.|.....:
 Frog   816 TTGHYTIKTGDTLQLSNTESMPILLGAGTTAAIYRNSQGEASERSLSIQRSEKVTSICLPPTPPY 880

  Fly   856 EERRIPLEVL------------------TDMPGRKVSKHHEHHIALNCPWSRTELPIAVDFQPAM 902
            ......|:|:                  .|.|....|...|..:.::||||.....|::.||..:
 Frog   881 HILEFELDVVCLLPEAGHLLNGELPRRGRDQPDALSSNTTEQRVTVDCPWSIYSTIISLSFQLPL 945

  Fly   903 EATCRLHTCGTQKFLQVIMKG-MEAHLLLQHAQVKCDVPGVQLLDLNPESQQPIEIYKSLTVTYL 966
            .|...|.:.||:|::||.::. .|....|..:.:. ....::...|:....|.::..:.|  .::
 Frog   946 RAQHTLLSSGTRKYIQVCVENTCEFQFQLSESSLS-STRDLKFRPLHRAGSQDLQSQQCL--FFI 1007

  Fly   967 YEIQVEPLKTEHEL-PVVKVHFVIKYASLSQPDV---WRTYGCAFDLVDYTTLFKLQAQLEP--- 1024
            :|:...|     :| |.:..||.:.:..:..|:.   .:.:...|.|..:.||:.::|::.|   
 Frog  1008 WEVTWCP-----DLPPSLPCHFSVSFYPVPSPNPCGHLQPFTYLFHLEHFYTLYTVRAEISPPPD 1067

  Fly  1025 NELCRLRTVCNMNLKITKV-------HENPYTD--------LMYEVLNDQNLWAVCGRSAGVVSM 1074
            .:.|:...:|::.:.||::       .|...||        |.|:|.:..:.|||||||:|||.|
 Frog  1068 AQFCKTGALCSLEVCITRLCDSLENDKEETLTDCNGYSSAQLFYQVADGGSNWAVCGRSSGVVMM 1132

  Fly  1075 --KDVDSHSISLDVMPLSTGFLPMPSIRLSKY----------------------------TAGGK 1109
              |:...|::.::||||..||||.|.:||.:|                            ...|:
 Frog  1133 PVKEGACHTLHMEVMPLFAGFLPYPDVRLFRYLPHHSHSQQLDADSWIENDSVSVEDPCELGSGR 1197

  Fly  1110 SKTDG------------HS-----KVHPFPPGQVYNSTKSMQIHVIAS 1140
            :::.|            |.     ::.||.|||:.|.:...||.|:.|
 Frog  1198 AQSRGLISPGATGASVEHKGLPMPRLQPFHPGQISNGSLGRQILVVPS 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIDLNP_650431.1 TRAPPC10 978..1138 CDD:289361 57/228 (25%)
trappc10XP_002941022.2 TRAPPC10 1017..1243 CDD:372206 56/225 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 410 1.000 Domainoid score I677
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37751
Inparanoid 1 1.050 467 1.000 Inparanoid score I1498
OMA 1 1.010 - - QHG46353
OrthoDB 1 1.010 - - D107574at33208
OrthoFinder 1 1.000 - - FOG0003974
OrthoInspector 1 1.000 - - oto102979
Panther 1 1.100 - - LDO PTHR13251
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5793
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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