DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF254

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_975011.3 Gene:ZNF254 / 9534 HGNCID:13047 Length:659 Species:Homo sapiens


Alignment Length:293 Identity:109/293 - (37%)
Similarity:144/293 - (49%) Gaps:13/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 TTSGAATTPELKYHCDRCNAGFAVEKSL----MIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQ 377
            ||.....|.|..|.|:.|...|....:|    .||.|:|     .|||.||.|.|:....|..|:
Human   282 TTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKK-----PYKCEECGKAFIWSSTLTRHK 341

  Fly   378 ASHGA---HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKP 439
            ..|..   :.|.|||........|:.|.:. |....|.:|..|.|.|..||||..|..||.|||.
Human   342 RMHTGEKPYKCEECGKAFSQSSTLTTHKII-HTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKL 405

  Fly   440 FVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLAR 504
            :.|..|||.|.:::||..||:.|:..|.:|||.|..:|:..:.||.|.|.||.:||::||.|...
Human   406 YKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKA 470

  Fly   505 FTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQM 569
            |..|.:|.:|||.||||:||.|:.|...|:..:.|..|:..||||:||.|..|.|.|........
Human   471 FIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTK 535

  Fly   570 HQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            |:..|..|:.|.|..|.:.||....:.:|...|
Human   536 HKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIH 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 8/26 (31%)
COG5048 <357..570 CDD:227381 86/215 (40%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 427..451 CDD:290200 12/23 (52%)
C2H2 Zn finger 442..490 CDD:275368 20/47 (43%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 12/24 (50%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 510..534 CDD:290200 12/23 (52%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 539..563 CDD:290200 12/23 (52%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
ZNF254NP_975011.3 KRAB 13..73 CDD:214630
C2H2 Zn finger 184..204 CDD:275368
C2H2 Zn finger 212..260 CDD:275368
COG5048 264..625 CDD:227381 109/293 (37%)
C2H2 Zn finger 268..288 CDD:275368 2/5 (40%)
C2H2 Zn finger 296..316 CDD:275368 4/19 (21%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 6/20 (30%)
C2H2 Zn finger 380..400 CDD:275368 9/19 (47%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 464..484 CDD:275368 9/19 (47%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..652 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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