DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6654 and ZNF235

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_004225.3 Gene:ZNF235 / 9310 HGNCID:12866 Length:738 Species:Homo sapiens


Alignment Length:310 Identity:111/310 - (35%)
Similarity:155/310 - (50%) Gaps:33/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFAVEKSLMIH-RRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGA---HN 384
            |.|..|.||.|..||:....|.|| |...|  .:.|||..|.|.|....||..|:..|..   :.
Human   370 TGEKPYRCDSCGKGFSRSTDLNIHCRVHTG--EKPYKCEVCGKGFTQRSHLQAHERIHTGEKPYK 432

  Fly   385 CPECGIRCDSKEALSKHM-----------------------VQGHKR----NLRNQCNICQKVFT 422
            |.:||.|......|..|.                       :..|:|    ....:|..|.|.|:
Human   433 CGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGKGFS 497

  Fly   423 MLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHA 487
            ..|:.:.|.|:|||||||.||:|||.|:|::..:.|:..|:..|.:|||:|...|.....|.:|.
Human   498 SASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQ 562

  Fly   488 RTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPY 552
            |.|||:||::||.|...|:.:.:|..|:..||||:|:.||.|..||:..:.|:.|:|.||||:||
Human   563 RVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPY 627

  Fly   553 VCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            .|..|.|.|:||.:.|:||..|.||:.:.|..|.:||.....:.:|...|
Human   628 KCDTCGKAFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVH 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 10/23 (43%)
COG5048 <357..570 CDD:227381 87/242 (36%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 6/43 (14%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 18/47 (38%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 12/24 (50%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..563 CDD:290200 13/23 (57%)
C2H2 Zn finger 554..574 CDD:275368 9/19 (47%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
ZNF235NP_004225.3 KRAB A domain 6..47
KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
KRAB B domain 48..80
C2H2 Zn finger 266..285 CDD:275368
COG5048 321..662 CDD:227381 107/293 (37%)
C2H2 Zn finger 321..341 CDD:275368
zinc finger domain 321..341
zf-H2C2_2 333..358 CDD:290200
C2H2 Zn finger 349..369 CDD:275368
zinc finger domain 349..369
C2H2 Zn finger 377..397 CDD:275368 9/19 (47%)
zinc finger domain 377..397 9/19 (47%)
zf-H2C2_2 389..414 CDD:290200 11/26 (42%)
C2H2 Zn finger 405..425 CDD:275368 7/19 (37%)
zinc finger domain 405..425 7/19 (37%)
zf-H2C2_2 417..442 CDD:290200 8/24 (33%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
zinc finger domain 433..453 6/19 (32%)
zf-H2C2_2 448..469 CDD:290200 1/20 (5%)
C2H2 Zn finger 461..481 CDD:275368 2/19 (11%)
zinc finger domain 461..481 2/19 (11%)
zf-H2C2_2 476..498 CDD:290200 6/21 (29%)
C2H2 Zn finger 489..509 CDD:275368 7/19 (37%)
zinc finger domain 489..509 7/19 (37%)
zf-H2C2_2 501..526 CDD:290200 15/24 (63%)
C2H2 Zn finger 517..537 CDD:275368 8/19 (42%)
zinc finger domain 517..537 8/19 (42%)
zf-H2C2_2 529..553 CDD:290200 7/23 (30%)
C2H2 Zn finger 545..565 CDD:275368 7/19 (37%)
zinc finger domain 545..565 7/19 (37%)
zf-H2C2_2 560..582 CDD:290200 11/21 (52%)
C2H2 Zn finger 573..593 CDD:275368 6/19 (32%)
zinc finger domain 573..593 6/19 (32%)
zf-H2C2_2 585..610 CDD:290200 12/24 (50%)
C2H2 Zn finger 601..621 CDD:275368 8/19 (42%)
zinc finger domain 601..621 8/19 (42%)
zf-H2C2_2 613..638 CDD:290200 13/24 (54%)
C2H2 Zn finger 629..649 CDD:275368 9/19 (47%)
zinc finger domain 629..649 9/19 (47%)
zf-H2C2_2 641..665 CDD:290200 9/23 (39%)
C2H2 Zn finger 657..677 CDD:275368 5/19 (26%)
zinc finger domain 657..677 5/19 (26%)
zf-H2C2_2 670..694 CDD:290200 2/8 (25%)
C2H2 Zn finger 685..705 CDD:275368
zinc finger domain 685..705
C2H2 Zn finger 713..733 CDD:275368
zinc finger domain 713..733
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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