DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF559

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001189335.1 Gene:ZNF559 / 84527 HGNCID:28197 Length:602 Species:Homo sapiens


Alignment Length:619 Identity:157/619 - (25%)
Similarity:232/619 - (37%) Gaps:191/619 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 ISCPVATTDQ--AVQTTSWEPDRCTASVQT----DAVTTTDAEQNTSLIKSTISVDLDYEGEGEV 152
            :|||...:..  .:..:.:|.:|..|...|    |:||..|           ::||...|     
Human    42 LSCPDHLSQDVFCLHESKFEEERMVAGWLTNYSQDSVTFED-----------VAVDFTQE----- 90

  Fly   153 FDYELPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIFEGVDNEA 217
             ::.|.|:                        ||.| :|.  |..||      |......||.|:
Human    91 -EWTLLDQ------------------------TQRN-LYR--DVMLE------NYKNLVAVDWES 121

  Fly   218 EIITV-TAPQVTTRKSAAKLLTQQENDKHQTPVGSKE--EARELEKEQVPQSAKRTSRRRGVVKQ 279
            .|.|. :|||....:.....:.:.|.:..     .:|  :..:.||.....|..:|.||....|:
Human   122 HINTKWSAPQQNFLQGKTSSVVEMERNHF-----GEELFDFNQCEKALSEHSCLKTHRRTYFRKK 181

  Fly   280 DVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSL 344
            ....   :..|.:.::..:.|..|            .|..|    .||. :|::|...|:....|
Human   182 TCEC---NQCEKAFRKPSIFTLHK------------KTDIG----EELP-NCNQCETAFSQHLHL 226

  Fly   345 M--------------IHRRQKGCINRNYKCNECEKVFVSPDHLAE------------HQA----- 378
            :              .|.::|     .|||::|||...|..||.|            |:.     
Human   227 VCKKTSQNLHLVCKKTHTQEK-----PYKCSDCEKGLPSSSHLRECVRIYGGERPYTHKEYVETF 286

  Fly   379 SHGA--------------HNCPECGIRCDSKEALSKHMVQGHKR--------------------- 408
            ||..              :.|..||........|::|: :.|.|                     
Human   287 SHSTALFVHMQTQDGEKFYECKACGKPFTESSYLTQHL-RTHSRVLPIEHKKFGKAFAFSPDLAK 350

  Fly   409 --NLRNQ-----CNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETK 466
              .||.:     ||.|.|.||..|.|..|:|:||||||:.||.|||:||.::.|.:|:..|:..|
Human   351 HIRLRTRGKHYVCNECGKEFTCFSKLNIHIRVHTGEKPYECNKCGKAFTDSSGLIKHRRTHTGEK 415

  Fly   467 SFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCS--------------------- 510
            .::|:.|..:|...:.||.|.|||||:||::|:.|...|..|.|                     
Human   416 PYECKECGKAFANSSHLTVHMRTHTGEKPYQCKECGKAFINSSSFKSHMQTHPGVKPYDCQQCGK 480

  Fly   511 -------LAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQ 568
                   |.:|.|.|:.|||:.|:.|...|...:.|..|:|.|||||||.|..|.:.|:......
Human   481 AFIRSSFLIRHLRSHSAERPFECEECGKAFRYSSHLSQHKRIHTGERPYKCQKCGQAFSISSGLT 545

  Fly   569 MHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            :|.|||.|||.:.|..|.:.|.....:..||..|
Human   546 VHMRTHTGERPFECQECGKAFTRSTYLIRHLRSH 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 6/36 (17%)
COG5048 <357..570 CDD:227381 90/299 (30%)
C2H2 Zn finger 360..380 CDD:275368 9/36 (25%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 10/19 (53%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 18/47 (38%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 8/47 (17%)
zf-H2C2_2 510..534 CDD:290200 10/51 (20%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 13/23 (57%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
ZNF559NP_001189335.1 KRAB 78..>118 CDD:214630 16/89 (18%)
KRAB 78..117 CDD:279668 16/88 (18%)
C2H2 Zn finger 158..177 CDD:275368 6/18 (33%)
C2H2 Zn finger 185..240 CDD:275368 11/74 (15%)
COG5048 212..601 CDD:227381 109/374 (29%)
C2H2 Zn finger 213..243 CDD:275368 4/29 (14%)
C2H2 Zn finger 251..299 CDD:275368 11/47 (23%)
C2H2 Zn finger 307..327 CDD:275368 5/20 (25%)
C2H2 Zn finger 363..383 CDD:275368 10/19 (53%)
zf-H2C2_2 376..399 CDD:290200 14/22 (64%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
zf-H2C2_2 404..428 CDD:290200 7/23 (30%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
zf-H2C2_2 431..454 CDD:290200 12/22 (55%)
zf-C2H2 445..467 CDD:278523 5/21 (24%)
C2H2 Zn finger 447..467 CDD:275368 5/19 (26%)
C2H2 Zn finger 475..495 CDD:275368 3/19 (16%)
zf-H2C2_2 488..512 CDD:290200 10/23 (43%)
C2H2 Zn finger 503..523 CDD:275368 6/19 (32%)
zf-H2C2_2 515..539 CDD:290200 12/23 (52%)
C2H2 Zn finger 531..551 CDD:275368 5/19 (26%)
zf-H2C2_2 544..568 CDD:290200 10/23 (43%)
C2H2 Zn finger 559..579 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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