DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and TFIIIA

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001322779.1 Gene:TFIIIA / 843536 AraportID:AT1G72050 Length:427 Species:Arabidopsis thaliana


Alignment Length:365 Identity:78/365 - (21%)
Similarity:121/365 - (33%) Gaps:134/365 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 YHCDRC----NAGFAVEKSLMIH--------RRQKGC-----INRNYKCNECEKVFVSPDHLAEH 376
            |.|..|    :..:.:.|.:..|        |..:.|     .:.|:.|.||...|..|.||.:|
plant    35 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQH 99

  Fly   377 QASHG---AHNC--PECGIRCDSKEALSKHMVQGHKRNLRNQC--NICQKVFTMLSTLRDHMRIH 434
            ..||.   :..|  .:|......|:.|::|::. ||..| .:|  ..|:..|::...:..|::.:
plant   100 MQSHSLERSFTCYVDDCAASYRRKDHLNRHLLT-HKGKL-FKCPKENCKSEFSVQGNVGRHVKKY 162

  Fly   435 --------------------------------------------------------------TGE 437
                                                                          ||:
plant   163 HSNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECSTGQ 227

  Fly   438 KPFVCNI--CGKSFTQNANLRQHKLRHSETKS------------------------------FKC 470
            |..||..  |||:|...:.|::|:..|.:..|                              ..|
plant   228 KQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINC 292

  Fly   471 ELCPHSFVTKAELTSHARTHTGDK---PFECEV--CLARFTTSCSLAKH-KRKHTGERPYACDL- 528
            |:|....: |..:..|.|||..|.   ..:|||  |.:.|:.:.:|.|| |..|...||:.|.. 
plant   293 EICGSKHL-KKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFP 356

  Fly   529 -CPMRFTALNVLKNHRRTHTGERPYVCPFCSKT---FTQR 564
             |.|||...:|...|.  ::|...|.|....:|   ||.|
plant   357 GCGMRFAYKHVRNKHE--NSGYHVYTCGDFVETDEDFTSR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 6/39 (15%)
COG5048 <357..570 CDD:227381 71/320 (22%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 5/22 (23%)
C2H2 Zn finger 414..434 CDD:275368 4/21 (19%)
zf-H2C2_2 427..451 CDD:290200 10/87 (11%)
C2H2 Zn finger 442..490 CDD:275368 15/79 (19%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 10/29 (34%)
C2H2 Zn finger 498..518 CDD:275368 9/22 (41%)
zf-H2C2_2 510..534 CDD:290200 11/26 (42%)
C2H2 Zn finger 526..546 CDD:275368 7/21 (33%)
zf-H2C2_2 539..563 CDD:290200 6/26 (23%)
C2H2 Zn finger 554..574 CDD:275368 5/14 (36%)
C2H2 Zn finger 582..602 CDD:275368
TFIIIANP_001322779.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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