DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF90

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:300 Identity:108/300 - (36%)
Similarity:151/300 - (50%) Gaps:16/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 SDAEPSP-KQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRR- 349
            |..|..| |....|...|||:        ..:|.....|.|..|.|:.|...|.....|..|:| 
Human   306 SHTEEKPYKCEECGKAFKLSS--------ILSTHKRIHTGEKPYKCEECGKAFRRSLVLRTHKRI 362

  Fly   350 QKGCINRNYKCNECEKVFVSPDHLAEHQASHG---AHNCPECGIRCDSKEALSKHMVQGHKRNLR 411
            ..|  .:.|||::|.|.|:|...|.:|:.||.   .:.|.|||........|:.|.: .|.....
Human   363 HTG--EKPYKCDKCGKAFISSSLLYKHKISHSEKKPYKCEECGKAFKRSSTLTIHKI-SHTEEKP 424

  Fly   412 NQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHS 476
            .:|..|.|||...|.|..|..||:||||:.|..|||:|.:::||..||:.|:|.|.:||:.|..:
Human   425 YKCQECDKVFKRSSALSTHKIIHSGEKPYKCEECGKAFKRSSNLTTHKISHTEEKLYKCQECDKA 489

  Fly   477 FVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKN 541
            |...:.|::|...|:|:.|::||.|...|..|..|:|||..|||.:||.|:.|...|...:.|.:
Human   490 FKYSSALSTHKIIHSGENPYKCEECGKAFKRSSVLSKHKIIHTGAKPYKCEECGKAFKRSSQLTS 554

  Fly   542 HRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYI 581
            |:.:||||:||.|..|.|.|....|...|:|.|.|::.||
Human   555 HKISHTGEKPYKCEECGKAFNLSSDLNTHKRIHIGQKAYI 594

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/23 (30%)
COG5048 <357..570 CDD:227381 83/215 (39%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 6/20 (30%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 13/23 (57%)
C2H2 Zn finger 442..490 CDD:275368 18/47 (38%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 9/24 (38%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 5/19 (26%)
zf-H2C2_2 539..563 CDD:290200 12/23 (52%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 107/299 (36%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
KRAB 6..43 CDD:279668
COG5048 170..501 CDD:227381 69/205 (34%)
C2H2 Zn finger 175..195 CDD:275368
C2H2 Zn finger 203..223 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368
zf-H2C2_2 272..296 CDD:290200