DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and ZNF43

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001243582.1 Gene:ZNF43 / 7594 HGNCID:13109 Length:818 Species:Homo sapiens


Alignment Length:419 Identity:133/419 - (31%)
Similarity:188/419 - (44%) Gaps:52/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 ECNLAIFEGVDNEAEIITV-----TAPQVTTRKSAAKLLTQQENDKHQTPVGSKEEARELEKEQV 263
            ||..|.     |::.|:|.     |..:....|..||...|..|         ..|.:::...:.
Human   271 ECGKAF-----NKSSILTTHKIIRTGEKFYKCKECAKAFNQSSN---------LTEHKKIHPGEK 321

  Fly   264 PQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPS-------TTSGA 321
            |...:...:     ..:.|:|       ..|..|:.|..|   |......|.:       ||...
Human   322 PYKCEECGK-----AFNWPST-------LTKHKRIHTGEK---PYTCEECGKAFNQFSNLTTHKR 371

  Fly   322 ATTPELKYHCDRCNAGFAVEKSLMIHRR---QKGCINRNYKCNECEKVFVSPDHLAEHQASHGA- 382
            ..|.|..|.|..|...|:...:|..|::   :|    :.|||.||.|.|.....|.||:.:|.. 
Human   372 IHTAEKFYKCTECGEAFSRSSNLTKHKKIHTEK----KPYKCEECGKAFKWSSKLTEHKLTHTGE 432

  Fly   383 --HNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNIC 445
              :.|.|||...:....|:||. :.|......:|.:|.|.|...|.|..|.||||.|||:.|..|
Human   433 KPYKCEECGKAFNWPSTLTKHN-RIHTGEKPYKCEVCGKAFNQFSNLTTHKRIHTAEKPYKCEEC 496

  Fly   446 GKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCS 510
            ||:|::::||.:||..|.|.|.:|||.|..:|...::||.|..||||:||::||.|...|.....
Human   497 GKAFSRSSNLTKHKKIHIEKKPYKCEECGKAFKWSSKLTEHKITHTGEKPYKCEECGKAFNHFSI 561

  Fly   511 LAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQ 575
            |.||||.||||:||.|:.|...||..:.|..|::.||||:.|.|..|.|.|||..:...|::.|.
Human   562 LTKHKRIHTGEKPYKCEECGKAFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTHKKIHT 626

  Fly   576 GERIYICPVCNEEFKSMPEMRSHLAGHEQ 604
            |.:.|.|..|.:.|.....:..|...|.:
Human   627 GGKPYKCEECGKAFNQFSTLTKHKIIHTE 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 6/25 (24%)
COG5048 <357..570 CDD:227381 91/215 (42%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 7/20 (35%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 14/23 (61%)
C2H2 Zn finger 442..490 CDD:275368 20/47 (43%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 11/23 (48%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
ZNF43NP_001243582.1 KRAB 13..72 CDD:214630
KRAB 13..52 CDD:279668
C2H2 Zn finger 158..177 CDD:275370
C2H2 Zn finger 185..205 CDD:275368
C2H2 Zn finger 213..233 CDD:275368
C2H2 Zn finger 241..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368 6/22 (27%)
COG5048 295..763 CDD:227381 126/390 (32%)
C2H2 Zn finger 297..317 CDD:275368 6/28 (21%)
zf-H2C2_2 309..333 CDD:290200 3/37 (8%)
C2H2 Zn finger 325..345 CDD:275368 4/31 (13%)
zf-H2C2_2 338..362 CDD:290200 6/26 (23%)
C2H2 Zn finger 353..373 CDD:275368 3/19 (16%)
C2H2 Zn finger 381..401 CDD:275368 5/19 (26%)
zf-H2C2_2 393..417 CDD:290200 9/27 (33%)
C2H2 Zn finger 409..429 CDD:275368 8/19 (42%)
zf-H2C2_2 422..445 CDD:290200 8/22 (36%)
C2H2 Zn finger 437..457 CDD:275368 7/20 (35%)
zf-H2C2_2 450..474 CDD:290200 8/24 (33%)
C2H2 Zn finger 465..485 CDD:275368 8/19 (42%)
zf-H2C2_2 477..502 CDD:290200 14/24 (58%)
C2H2 Zn finger 521..541 CDD:275368 7/19 (37%)
zf-H2C2_2 534..558 CDD:290200 13/23 (57%)
C2H2 Zn finger 549..569 CDD:275368 9/19 (47%)
zf-H2C2_2 562..586 CDD:290200 14/23 (61%)
C2H2 Zn finger 577..597 CDD:275368 6/19 (32%)
zf-H2C2_2 589..614 CDD:290200 11/24 (46%)
C2H2 Zn finger 605..625 CDD:275368 7/19 (37%)
zf-H2C2_2 617..642 CDD:290200 7/24 (29%)
C2H2 Zn finger 633..653 CDD:275368 4/19 (21%)
C2H2 Zn finger 661..681 CDD:275368
zf-H2C2_2 674..697 CDD:290200
C2H2 Zn finger 689..709 CDD:275368
zf-H2C2_2 702..726 CDD:290200
C2H2 Zn finger 717..737 CDD:275368
zf-H2C2_2 729..754 CDD:290200
COG5048 742..>803 CDD:227381
C2H2 Zn finger 745..765 CDD:275368
zf-H2C2_2 757..782 CDD:290200
C2H2 Zn finger 773..793 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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