DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6654 and ZNF28

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_008900.3 Gene:ZNF28 / 7576 HGNCID:13073 Length:718 Species:Homo sapiens


Alignment Length:290 Identity:119/290 - (41%)
Similarity:154/290 - (53%) Gaps:21/290 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFA----VEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASHGA-- 382
            |.|..|.|..|:..||    :.|..:||..:|     .||||||.|||.....||.|...|.|  
Human   406 TGEKPYKCKVCDKAFAYNSYLAKHSIIHTGEK-----PYKCNECGKVFNQQSTLARHHRLHTAEK 465

  Fly   383 -HNCPECG--IRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNI 444
             :.|.||.  .||  |..|.:|. :.|......:|.:|.|.|...|.|.:|.|:||||||::||.
Human   466 PYKCEECDKVFRC--KSHLERHR-RIHTGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYMCNE 527

  Fly   445 CGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSC 509
            |||.|:..|||..|...|:..|.:|||.|...|..|:.:..|.|.|||:||::|:||...|....
Human   528 CGKVFSTKANLACHHKLHTAEKPYKCEECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDS 592

  Fly   510 SLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTH 574
            .||:|:|.||||:||.|:.|...|...:.|..|||.||||:||.|..|.|||:|......|.|.|
Human   593 HLAQHQRVHTGEKPYKCNECGKTFRQTSSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHRLH 657

  Fly   575 QGERIYICPVCNEEFKSMPEMRSHLAGHEQ 604
            .||:.|.|..|.:.|    ..::|||.|::
Human   658 SGEKPYKCNECGKVF----NQQAHLAQHQR 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 8/26 (31%)
COG5048 <357..570 CDD:227381 95/217 (44%)
C2H2 Zn finger 360..380 CDD:275368 10/19 (53%)
C2H2 Zn finger 385..406 CDD:275370 8/22 (36%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 20/47 (43%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 11/24 (46%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 12/23 (52%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 15/23 (65%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
ZNF28NP_008900.3 KRAB 8..>48 CDD:214630
KRAB 8..47 CDD:279668
COG5048 <143..373 CDD:227381
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368
COG5048 267..655 CDD:227381 107/256 (42%)
C2H2 Zn finger 273..293 CDD:275368
C2H2 Zn finger 301..321 CDD:275368
C2H2 Zn finger 329..349 CDD:275368
zf-H2C2_2 341..366 CDD:290200
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 370..394 CDD:290200
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 397..422 CDD:290200 6/15 (40%)
C2H2 Zn finger 413..433 CDD:275368 5/19 (26%)
zf-H2C2_2 425..450 CDD:290200 13/29 (45%)
C2H2 Zn finger 441..461 CDD:275368 10/19 (53%)
C2H2 Zn finger 469..489 CDD:275368 8/22 (36%)
zf-H2C2_2 481..506 CDD:290200 7/25 (28%)
C2H2 Zn finger 497..517 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 15/23 (65%)
C2H2 Zn finger 525..545 CDD:275368 10/19 (53%)
C2H2 Zn finger 553..573 CDD:275368 7/19 (37%)
zf-H2C2_2 565..590 CDD:290200 11/24 (46%)
C2H2 Zn finger 581..601 CDD:275368 8/19 (42%)
zf-H2C2_2 593..618 CDD:290200 13/24 (54%)
C2H2 Zn finger 609..629 CDD:275368 7/19 (37%)
zf-H2C2_2 621..646 CDD:290200 15/24 (63%)
C2H2 Zn finger 637..657 CDD:275368 8/19 (42%)
C2H2 Zn finger 665..685 CDD:275368 7/23 (30%)
zf-H2C2_2 677..702 CDD:290200 4/7 (57%)
C2H2 Zn finger 693..713 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.