DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zfp966

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001170878.1 Gene:Zfp966 / 667962 MGIID:3709288 Length:485 Species:Mus musculus


Alignment Length:311 Identity:111/311 - (35%)
Similarity:154/311 - (49%) Gaps:35/311 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFAVEKSLMIHRR-QKGCINRNYKCNECEKVFVSPDHLAEHQASHGA---HN 384
            |.|..|.|:.|...||....|.||:| ..|  .:.|:|.:|.|.|....||..|:.:|..   :.
Mouse   173 TGEKPYECNHCVKAFAKMSKLQIHKRIHTG--EKPYECKQCGKAFTQSSHLGIHKRTHTGEKPYE 235

  Fly   385 CPECG------------------------IRCDSKEALSKHMVQGHKRNLRN----QCNICQKVF 421
            |.:||                        .:|| |..:.:..:|.|||....    :|..|.|.|
Mouse   236 CKQCGKAFTRSSTLQTHKQTHTGEKPYECKQCD-KAFVRRGELQIHKRTHTGEKPYECKQCGKAF 299

  Fly   422 TMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSH 486
            ....||:.|.|.||||||:.|..|||:|..::.|:.||..|:..|.::|:.|..:||.:.||..|
Mouse   300 AQSGTLQIHKRTHTGEKPYECKQCGKAFAHSSTLQIHKRTHTGEKPYECKQCDKAFVKRGELQIH 364

  Fly   487 ARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERP 551
            .:||||:||:||:.|...|..|.:|..|:|.||||:|:.|:.|...|.....|:.|.||||||:|
Mouse   365 KQTHTGEKPYECKQCGKAFAQSGTLQVHERTHTGEKPFECNQCGKAFVQCIALRIHERTHTGEKP 429

  Fly   552 YVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH 602
            |.|..|.|.|......|:|:|||.||:.|.|..|.:.|.....::.|...|
Mouse   430 YECKQCGKAFAHSNTLQIHKRTHTGEKPYECKQCGKAFAHSSTLQIHKQTH 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 9/23 (39%)
COG5048 <357..570 CDD:227381 87/243 (36%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 7/44 (16%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
C2H2 Zn finger 442..490 CDD:275368 17/47 (36%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
C2H2 Zn finger 554..574 CDD:275368 7/19 (37%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
Zfp966NP_001170878.1 KRAB 22..63 CDD:460171
COG5048 94..478 CDD:227381 110/307 (36%)
C2H2 Zn finger 99..116 CDD:275368
C2H2 Zn finger 124..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
C2H2 Zn finger 208..228 CDD:275368 7/19 (37%)
C2H2 Zn finger 236..256 CDD:275368 3/19 (16%)
C2H2 Zn finger 264..284 CDD:275368 7/20 (35%)
C2H2 Zn finger 292..312 CDD:275368 8/19 (42%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..396 CDD:275368 7/19 (37%)
C2H2 Zn finger 404..424 CDD:275368 6/19 (32%)
C2H2 Zn finger 432..452 CDD:275368 7/19 (37%)
C2H2 Zn finger 460..480 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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