DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and 2010315B03Rik

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_011248168.1 Gene:2010315B03Rik / 630836 MGIID:1919321 Length:479 Species:Mus musculus


Alignment Length:417 Identity:128/417 - (30%)
Similarity:189/417 - (45%) Gaps:79/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 TRKSAAK--LLTQQENDKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEP 291
            ::||..|  :|...||   .|.:|...|...:|::      .::|||.|                
Mouse    70 SQKSLYKEVMLETYEN---LTAIGYNWEDHYIEEQ------FQSSRRDG---------------- 109

  Fly   292 SPKQHRLG--TQRKLSAPRAGTV---NGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRR-Q 350
               :|:.|  .::.......||.   :|.........|.|..|.|:||...||....|.||:| .
Mouse   110 ---RHKRGHTGEKPYECNHCGTAFARHGHLQRHKGTHTGEKLYECNRCGKVFAWNCHLRIHKRTH 171

  Fly   351 KGCINRNYKCNECEKVFVSPDHLAEHQASHGA---HNCPECGIRCDSKEALSKH-MVQGHKRNLR 411
            .|  .:.|:|::|...|.|...|..|:.:|..   :.|.:||      :|.::| .:|.|||...
Mouse   172 SG--EKPYECDQCGTAFASHCRLQRHKRTHTGEKPYECNQCG------KAFTQHSTLQVHKRTHT 228

  Fly   412 N----QCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCEL 472
            .    :|:.|.|.::..|.|:.|.|.||||||:|||.|||:|....:|:.||..|:..||::|:.
Mouse   229 GEKPYECSQCGKAYSRHSHLQRHKRTHTGEKPYVCNQCGKAFAYQNSLQYHKRTHTGEKSYECKQ 293

  Fly   473 CPHSFVTKAELTSHARTHT---------------------------GDKPFECEVCLARFTTSCS 510
            |...|..:..|..|.|||.                           |:||:||..|...|.:..:
Mouse   294 CGKFFPCRKHLQIHKRTHAGQKGYECNKCGKAFAFHSHFQRHKRHIGEKPYECNHCDKAFASHNN 358

  Fly   511 LAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQ 575
            |.||.|:||||:||.|:||...:...:.|:.|.|.||.|:||.|..|.|.|:|:...|:|:|.|.
Mouse   359 LQKHIRRHTGEKPYKCNLCDKAYAHHSHLQTHERVHTEEKPYKCNQCDKAFSQQSSLQVHKRIHT 423

  Fly   576 GERIYICPVCNEEFKSMPEMRSHLAGH 602
            ||:.|.|..|.:.|.....::.|...|
Mouse   424 GEKPYECNQCGKAFTCHRYLQRHKRTH 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 10/23 (43%)
COG5048 <357..570 CDD:227381 85/247 (34%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 6/21 (29%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..490 CDD:275368 18/47 (38%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
2010315B03RikXP_011248168.1 KRAB 50..90 CDD:460171 7/22 (32%)
COG5048 119..475 CDD:227381 112/340 (33%)
C2H2 Zn finger 123..143 CDD:275368 3/19 (16%)
C2H2 Zn finger 151..171 CDD:275368 9/19 (47%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 207..227 CDD:275368 9/25 (36%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 9/19 (47%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
C2H2 Zn finger 319..338 CDD:275368 0/18 (0%)
C2H2 Zn finger 346..366 CDD:275368 7/19 (37%)
C2H2 Zn finger 374..394 CDD:275368 6/19 (32%)
C2H2 Zn finger 402..422 CDD:275368 8/19 (42%)
C2H2 Zn finger 430..450 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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