DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Gm6710

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001158161.1 Gene:Gm6710 / 626832 MGIID:3779623 Length:554 Species:Mus musculus


Alignment Length:347 Identity:120/347 - (34%)
Similarity:171/347 - (49%) Gaps:42/347 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFAVEKSLMIHRR-QKGCINRNYKCNECEKVFVSPDHLAEHQASHGA---HN 384
            |.|..|.|.:|...|:....|.||:| ..|  .:.|:|.:|.|.|....||.:|:.:|..   :.
Mouse   210 TGEKPYECKQCGKAFSECSHLRIHKRTHTG--EKPYECKQCGKAFAHSSHLHKHERTHTGDKPYE 272

  Fly   385 CPECG---------------------IRCD--SKEALSKHMVQGHKRNLRN----QCNICQKVFT 422
            |.:||                     ..|:  .|.....:.:|.|||....    :||.|.|.|.
Mouse   273 CNQCGKAFAVIYTLQMHKRTHTGDKPYECNQCGKAFAVIYTLQMHKRTHTGDKPYECNQCGKAFA 337

  Fly   423 MLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHA 487
            ::.||:.|.:.||||||:.|..|||:||::.:||.||..|:..|.::|..|..:|....:|..|.
Mouse   338 VIYTLQRHKQTHTGEKPYKCKQCGKAFTRSCHLRIHKRTHTGEKPYECNQCGKAFARSGDLQKHK 402

  Fly   488 RTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPY 552
            |||||:||:||:.|...|..|..|.||:|.|||::||.|:.|...|...:.|:.|.||||||:||
Mouse   403 RTHTGEKPYECKQCGKAFAHSSHLHKHERTHTGDKPYECNQCGKAFAESSTLQIHNRTHTGEKPY 467

  Fly   553 VCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGH--------EQHDKRL 609
            .|..|.|.|..|...|:|:|||.||:.|.|..|.:.|.|..:::.|...|        :|..|..
Mouse   468 ECNQCGKAFITRRVLQIHKRTHTGEKPYECKQCGKAFASSSDLQKHKRTHSGAKPYECKQCGKAF 532

  Fly   610 VHFTFLS-NKENGSGALEEELN 630
            ...:.|. :|:..:|....|.|
Mouse   533 AQSSHLRIHKQTHTGERPYECN 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 8/23 (35%)
COG5048 <357..570 CDD:227381 89/242 (37%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
C2H2 Zn finger 385..406 CDD:275370 6/43 (14%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 13/23 (57%)
C2H2 Zn finger 442..490 CDD:275368 18/47 (38%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 5/19 (26%)
Gm6710NP_001158161.1 KRAB 3..44 CDD:366587
C2H2 Zn finger 79..97 CDD:275368
C2H2 Zn finger 105..125 CDD:275368
COG5048 129..515 CDD:227381 112/306 (37%)
C2H2 Zn finger 133..153 CDD:275368
C2H2 Zn finger 161..181 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 3/19 (16%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 10/19 (53%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
C2H2 Zn finger 413..433 CDD:275368 8/19 (42%)
C2H2 Zn finger 441..461 CDD:275368 6/19 (32%)
C2H2 Zn finger 469..489 CDD:275368 8/19 (42%)
C2H2 Zn finger 497..517 CDD:275368 5/19 (26%)
zf-H2C2_2 509..534 CDD:372612 4/24 (17%)
C2H2 Zn finger 525..545 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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