DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and zbtb43

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001103494.1 Gene:zbtb43 / 557590 ZFINID:ZDB-GENE-060526-378 Length:410 Species:Danio rerio


Alignment Length:264 Identity:63/264 - (23%)
Similarity:92/264 - (34%) Gaps:81/264 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 PSTTSGAATTPE----------LKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVS 369
            |:..|...::|:          ::.||.|   ...|..|:|.||::............|..:|.|
Zfish   162 PALESAGCSSPDAQSSENGSDAMESHCSR---PAYVPPSIMGHRKKVHVKAERQTREACGGLFGS 223

  Fly   370 PDHLAEHQASHGAHN------------CPECGIR-CDSKEAL---------------------SK 400
                 ||.|:....|            ..||..| |..:|.|                     ||
Zfish   224 -----EHTANDSDENNGNTVEDSFDEKLTECLDRDCTYEEPLDFYGSSMEGFSQTGDELSNPESK 283

  Fly   401 HMVQGHKRNL---RNQCNICQKVFTMLSTLRDHMRIHTG-----EKPFVCNICGKSFTQNANLRQ 457
            ..:|....|.   :::           |........|:|     .|.:.|. ||||||..:...:
Zfish   284 EKLQADGNNTDGPKDE-----------SPADSEQTSHSGFASVVYKLYPCQ-CGKSFTHKSQRDR 336

  Fly   458 HKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARF---------TTSCSLAK 513
            |...|...:.|.|.:|..||..|..|..|.:.|||.||:||.:|..||         |::|:.|.
Zfish   337 HMSMHLGLRPFGCAVCGKSFKMKHHLVGHMKIHTGIKPYECSLCSKRFMWRDSFNRHTSTCAKAH 401

  Fly   514 HKRK 517
            ..|:
Zfish   402 QTRR 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/22 (32%)
COG5048 <357..570 CDD:227381 52/212 (25%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 9/42 (21%)
C2H2 Zn finger 414..434 CDD:275368 1/19 (5%)
zf-H2C2_2 427..451 CDD:290200 9/28 (32%)
C2H2 Zn finger 442..490 CDD:275368 17/47 (36%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 12/33 (36%)
C2H2 Zn finger 498..518 CDD:275368 8/29 (28%)
zf-H2C2_2 510..534 CDD:290200 2/8 (25%)
C2H2 Zn finger 526..546 CDD:275368
zf-H2C2_2 539..563 CDD:290200
C2H2 Zn finger 554..574 CDD:275368
C2H2 Zn finger 582..602 CDD:275368
zbtb43NP_001103494.1 BTB 23..123 CDD:279045
BTB 34..124 CDD:197585
C2H2 Zn finger 323..341 CDD:275368 7/18 (39%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
zf-H2C2_2 361..384 CDD:290200 10/22 (45%)
C2H2 Zn finger 377..396 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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