DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and su(Hw)

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001247098.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:668 Identity:156/668 - (23%)
Similarity:251/668 - (37%) Gaps:188/668 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DGGSGSCLADMIREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFKIKCENSSRTLRQLLPNALPE 86
            |.|:|.   |.....|.|..|...|..||     ...::..   :||..|     .::|.....|
  Fly    37 DVGAGE---DSEASTTTTTSRTPSNKQEK-----RGSVAGS---RIKILN-----EEILGTPKTE 85

  Fly    87 EPDSKVSISCPVATTDQAVQTTSWEPDRCTASVQTDAVTTTDAE--------------QNTSLIK 137
            :..:..| :.|.|:|.:.:.... .|.....:|:|..:.|:.::              :||. ..
  Fly    86 KRGATKS-TAPAASTVKILNEKK-TPSATVTAVETTKIKTSPSKRKKMEHYVLQAVKSENTK-AD 147

  Fly   138 STISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLKDE--KEVVFTQTNVIYEGDDHELEQ 200
            :|::|..:   |.:..|:.|.|:  |:.      |.|.:::.  :|:|.|:       ||.:|.:
  Fly   148 TTVTVVTE---EDDTIDFILADD--EEV------VPGRIENNNGQEIVVTE-------DDEDLGE 194

  Fly   201 QIRECNLAIFEGVDNEA----------EIIT-------VTAPQVTTRKSAAKLLTQQENDKHQTP 248
            ...|      :|.|:..          ||:.       .|..:|.:.|...: ..:.::..|...
  Fly   195 DGDE------DGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLE-FCRYDSGYHLRK 252

  Fly   249 VGSKEEARELEKEQVPQSAKRTSRRRGVVKQDV------------------PATPPS-DAEPSPK 294
            ....:...::||:.|...           |:|:                  |..|.| ..:.|.:
  Fly   253 ADMLKNLEKIEKDAVVME-----------KKDICFCCSESYDTFHLGHINCPDCPKSFKTQTSYE 306

  Fly   295 QHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYK 359
            :|...|..:.|                      .:.|..|||....|..|.:|..|.....:.|.
  Fly   307 RHIFITHSEFS----------------------DFPCSICNANLRSEALLALHEEQHKSRGKPYA 349

  Fly   360 CNECEKVFVSPDHLAEHQASHGAHNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTML 424
            |..|.|.|....||..||....          |.|.|..:.            .|.:|.:||..|
  Fly   350 CKICGKDFTRSYHLKRHQKYSS----------CSSNETDTM------------SCKVCDRVFYRL 392

  Fly   425 STLRDHMRIHTG----EKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTS 485
            ..||.|::.|.|    :||                           .:.|..|.:.|.:.:.|..
  Fly   393 DNLRSHLKQHLGTQVVKKP---------------------------EYMCHTCKNCFYSLSTLNI 430

  Fly   486 HARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGER 550
            |.|||||:|||:|::|..:|:...:|.||:|.||||:||:|.:|...|....||..|.:.|||||
  Fly   431 HIRTHTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGER 495

  Fly   551 PYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQHDKRLVHFTFL 615
            |:.|..|.|:|.|....:.|.:||  .|.:.|..|:|:||:..::..|:..|.: .||.| |:..
  Fly   496 PHKCDECGKSFIQATQLRTHSKTH--IRPFPCEQCDEKFKTEKQLERHVKTHSR-TKRPV-FSCA 556

  Fly   616 SNKEN--GSGALEEELNE 631
            ..|.|  ....|:|.::|
  Fly   557 ECKRNFRTPALLKEHMDE 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071 13/56 (23%)
C2H2 Zn finger 331..354 CDD:275368 8/22 (36%)
COG5048 <357..570 CDD:227381 67/216 (31%)
C2H2 Zn finger 360..380 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275370 3/20 (15%)
C2H2 Zn finger 414..434 CDD:275368 8/19 (42%)
zf-H2C2_2 427..451 CDD:290200 7/27 (26%)
C2H2 Zn finger 442..490 CDD:275368 6/47 (13%)
C2H2 Zn finger 470..487 CDD:275368 4/16 (25%)
zf-H2C2_2 482..507 CDD:290200 13/24 (54%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 12/23 (52%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 12/23 (52%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
su(Hw)NP_001247098.1 C2H2 Zn finger 292..313 CDD:275368 5/20 (25%)
COG5048 <312..517 CDD:227381 78/275 (28%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
zf-C2H2 348..368 CDD:278523 8/19 (42%)
C2H2 Zn finger 350..368 CDD:275368 7/17 (41%)
C2H2 Zn finger 382..402 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-H2C2_2 428..451 CDD:290200 12/22 (55%)
C2H2 Zn finger 443..463 CDD:275368 7/19 (37%)
zf-H2C2_2 455..479 CDD:290200 12/23 (52%)
COG5048 <467..620 CDD:227381 39/112 (35%)
C2H2 Zn finger 471..491 CDD:275368 6/19 (32%)
zf-H2C2_2 484..508 CDD:290200 12/23 (52%)
C2H2 Zn finger 499..519 CDD:275368 6/19 (32%)
C2H2 Zn finger 525..545 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..572 CDD:275368 4/16 (25%)
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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