DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG5245

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_650197.1 Gene:CG5245 / 41530 FlyBaseID:FBgn0038047 Length:501 Species:Drosophila melanogaster


Alignment Length:517 Identity:134/517 - (25%)
Similarity:204/517 - (39%) Gaps:114/517 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 DEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELEQQIRECNLAIF-------EGVDNE 216
            |||.::.|.           |:|::|     |...|..|||.:|:..|...:       :||.::
  Fly    13 DEPPQEDTF-----------EEELIF-----ISNSDFEELESEIKIENFCSYGKDLEPVKGVPSK 61

  Fly   217 AEI----ITVTAP---QVTTRK--SAAKLLTQQENDKHQTPVGSKEEARELEKEQVPQS-AKRTS 271
            .:.    |....|   |..|.|  ...|..|::||.:....:.::|  |..|.....:| .:||.
  Fly    62 LKTCKSKIAKKRPLRKQTDTFKCTQCQKTFTRKENLESHLRLHAEE--RPFECSHCSKSFGRRTH 124

  Fly   272 RRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTSGAATTPELKYHCDRCNA 336
            .:|.::|.        :..|....|         ..:..|.|..........|.|..:.|.:|:.
  Fly   125 YKRHLLKH--------EKRPHKCSH---------CSKTFTQNSSLKQHLHEHTGERPFKCTQCST 172

  Fly   337 GFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDHLAEHQASH---GAHNCPECGIRCDSKEAL 398
            .||.:..|.:|.|... ..|.::|..|||.|.:..||.||..:|   ....|..|......:..|
  Fly   173 SFARKSHLQVHLRTHS-EERPFECTHCEKAFKNNSHLQEHLRTHQEARPFKCSHCSKSFKLRSIL 236

  Fly   399 SKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLR-- 461
            .||::...:|:.:  |..|.|.|....:|:.|:|:|.||.||.|..|.::|.:|:.|:.|.|.  
  Fly   237 QKHLLTHAERSFK--CTQCPKTFLQNDSLQIHLRVHAGEDPFKCPHCSETFARNSRLQLHLLEHA 299

  Fly   462 --------------------------HSETKSFKCELCPHSFVTKAELTSHARTHTGDKPF---- 496
                                      |:..:.:||..|..||..|:.|..|.:.|||::||    
  Fly   300 GKEPLKCSQCSATFAMRSLYRVHVRLHTRERQYKCAECSKSFFKKSHLVEHQQVHTGERPFKCTH 364

  Fly   497 ------------------------ECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALN 537
                                    :|..|...|..|..|..|.::|||:..:.|..|...:|..:
  Fly   365 CFKDFKCRTHLRVHMLDHIGEKVPKCSYCSKEFKLSSQLLVHLQEHTGKNQFECPHCSKSYTTSS 429

  Fly   538 VLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHL 599
            .|..|.||||||.|:.|..|||.|.:..:.|.|.|||.||:.|.|..|:..:.....:..||
  Fly   430 TLHMHLRTHTGELPFKCSHCSKLFARSAEHQEHLRTHTGEKPYKCSHCSTRYTQKSSLGRHL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/22 (32%)
COG5048 <357..570 CDD:227381 76/271 (28%)
C2H2 Zn finger 360..380 CDD:275368 9/19 (47%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
zf-H2C2_2 427..451 CDD:290200 11/23 (48%)
C2H2 Zn finger 442..490 CDD:275368 16/75 (21%)
C2H2 Zn finger 470..487 CDD:275368 6/16 (38%)
zf-H2C2_2 482..507 CDD:290200 10/52 (19%)
C2H2 Zn finger 498..518 CDD:275368 6/19 (32%)
zf-H2C2_2 510..534 CDD:290200 7/23 (30%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 8/19 (42%)
C2H2 Zn finger 582..602 CDD:275368 4/18 (22%)
CG5245NP_650197.1 COG5048 74..478 CDD:227381 114/425 (27%)
C2H2 Zn finger 84..104 CDD:275368 4/19 (21%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 139..159 CDD:275368 3/28 (11%)
C2H2 Zn finger 167..187 CDD:275368 7/19 (37%)
zf-H2C2_2 179..204 CDD:290200 9/25 (36%)
C2H2 Zn finger 195..215 CDD:275368 9/19 (47%)
C2H2 Zn finger 223..243 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 0/19 (0%)
C2H2 Zn finger 334..354 CDD:275368 7/19 (37%)
C2H2 Zn finger 362..382 CDD:275368 0/19 (0%)
C2H2 Zn finger 390..410 CDD:275368 6/19 (32%)
C2H2 Zn finger 418..438 CDD:275368 6/19 (32%)
C2H2 Zn finger 446..466 CDD:275368 8/19 (42%)
C2H2 Zn finger 474..492 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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