DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG6813

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:239 Identity:67/239 - (28%)
Similarity:105/239 - (43%) Gaps:47/239 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 IRCDSKEALSKHMV-----QGHKRNLRNQCNICQKV----------FTMLSTLRDHMRIHTGEKP 439
            |.||||:..:..::     .....:..::..:|.:|          .:..::|.....|..|..|
  Fly    77 IECDSKDCSTDPIIYEDIDDNQIESELDESILCPEVKDLPMPSAEKVSAPTSLNHQKSIGGGTGP 141

  Fly   440 FVCNICGKSFTQNANLRQHKLRHSETKSFKCEL--CPHSFVTKAELTSHARTHTGDKPFECEVCL 502
            :||..||:.....:|.::|.|||:..|:|.|..  |..||.|:.|||||.|.             
  Fly   142 YVCPDCGRIINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRI------------- 193

  Fly   503 ARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDC 567
                           ||||:||.|..||.||::....:.|.|.|..||.|.|..|.|:|...|..
  Fly   194 ---------------HTGEQPYVCVYCPRRFSSSGARQEHHRRHRNERRYECDTCKKSFVSSGCL 243

  Fly   568 QMHQRTHQGERIYICPVCNEEFKSMPEMRSHLAG--HEQHDKRL 609
            :.|:..|...|.:.|.||.:.||.:..:.:||:.  |::.:::|
  Fly   244 RKHKMIHVDARNHYCYVCQKHFKRISHLMTHLSSNIHKRKEEKL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 55/196 (28%)
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 3/29 (10%)
zf-H2C2_2 427..451 CDD:290200 8/23 (35%)
C2H2 Zn finger 442..490 CDD:275368 21/49 (43%)
C2H2 Zn finger 470..487 CDD:275368 9/18 (50%)
zf-H2C2_2 482..507 CDD:290200 6/24 (25%)
C2H2 Zn finger 498..518 CDD:275368 0/19 (0%)
zf-H2C2_2 510..534 CDD:290200 10/23 (43%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
zf-H2C2_2 539..563 CDD:290200 10/23 (43%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 7/21 (33%)
CG6813NP_001163590.1 zf-AD 6..76 CDD:285071
C2H2 Zn finger 144..164 CDD:275368 6/19 (32%)
C2H2 Zn finger 172..194 CDD:275368 11/49 (22%)
zf-H2C2_2 186..211 CDD:290200 17/52 (33%)
UFD2 <256..>294 CDD:227443 9/32 (28%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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