DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and M1BP

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP / 41042 FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster


Alignment Length:187 Identity:66/187 - (35%)
Similarity:91/187 - (48%) Gaps:14/187 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 KLRHSETKS------FKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRK 517
            |:|..:.:.      :.||.|.:....:.....|.|.|.|||.|.||:|.:||.|:..|.:|.||
  Fly   236 KVRSDDARRRGTGGVYICEQCGNHIKGRMAFELHCRRHRGDKQFGCELCQSRFCTTSELKRHMRK 300

  Fly   518 HTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYIC 582
            ||||||:||..|...||.......|.||||.||||||..|.|.||.....:.|...|.|||.|.|
  Fly   301 HTGERPFACKYCGRCFTDYTTRVKHERTHTNERPYVCGTCGKAFTTGYILKNHMLIHSGERAYRC 365

  Fly   583 PVCNEEFKSMPEMRSHLAG--HEQHDKRLVHFTFLSNKENGSGALEEELNEMTESAL 637
            .:|::.|.....:.:|...  |::|.::......|..::      :.||.|..|.:|
  Fly   366 ELCDKSFMLPTHLSTHFRSGVHKRHLEKAEMKQVLEQEQ------KRELKEEEEDSL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 48/116 (41%)
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 385..406 CDD:275370
C2H2 Zn finger 414..434 CDD:275368
zf-H2C2_2 427..451 CDD:290200
C2H2 Zn finger 442..490 CDD:275368 7/36 (19%)
C2H2 Zn finger 470..487 CDD:275368 3/16 (19%)
zf-H2C2_2 482..507 CDD:290200 12/24 (50%)
C2H2 Zn finger 498..518 CDD:275368 9/19 (47%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 526..546 CDD:275368 6/19 (32%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 4/21 (19%)
M1BPNP_649825.1 zf-AD 13..84 CDD:214871
C2H2 Zn finger 253..273 CDD:275368 5/19 (26%)
COG5048 276..>331 CDD:227381 28/54 (52%)
C2H2 Zn finger 281..301 CDD:275368 9/19 (47%)
zf-H2C2_2 293..317 CDD:290200 13/23 (57%)
C2H2 Zn finger 309..329 CDD:275368 6/19 (32%)
zf-H2C2_2 324..346 CDD:290200 14/21 (67%)
C2H2 Zn finger 337..357 CDD:275368 6/19 (32%)
zf-H2C2_2 350..372 CDD:290200 8/21 (38%)
C2H2 Zn finger 365..383 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.960

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