DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and Zif

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:149 Identity:48/149 - (32%)
Similarity:74/149 - (49%) Gaps:7/149 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 SETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACD 527
            :|...:.|::|.:.:..:..:..|.|.|.|...:.||:|.|:|.....|.||...|||.:||.|.
  Fly   218 TEKGGYICDVCGNFYEKRGRMMEHRRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCS 282

  Fly   528 LCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSM 592
            .|..:|...:|||:|...|.|.:||||..|.|.|........|:..|...::|.|..||::|:.:
  Fly   283 FCSRQFFYESVLKSHENVHRGIKPYVCKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLL 347

  Fly   593 PEMRSHLAGHEQHDKRLVH 611
            ..||       ||::..:|
  Fly   348 HHMR-------QHEETKLH 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 36/106 (34%)
C2H2 Zn finger 360..380 CDD:275368
C2H2 Zn finger 385..406 CDD:275370
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..490 CDD:275368 5/26 (19%)
C2H2 Zn finger 470..487 CDD:275368 2/16 (13%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
C2H2 Zn finger 526..546 CDD:275368 7/19 (37%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 6/19 (32%)
ZifNP_649657.1 zf-AD 9..87 CDD:462262
C2H2 Zn finger 225..245 CDD:275368 4/19 (21%)
COG5048 <250..369 CDD:227381 41/117 (35%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 5/19 (26%)
C2H2 Zn finger 337..353 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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