DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG11247

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:429 Identity:114/429 - (26%)
Similarity:174/429 - (40%) Gaps:101/429 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 RRGVVKQDVP----------ATPPSDAEPSPKQHRLGTQRK--LSAPRAGTVNGPSTTSGAATTP 325
            ||.|.|:|..          ::||:..|.||.......:||  |::.|...|:......|...:.
  Fly     5 RRSVSKEDAVSLLTDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSK 69

  Fly   326 ELKYHCDRCNAGFAVEKSLMIHRRQKGCINR-NYKCNECEKVFVSPDHLAEHQASHG---AHNCP 386
            :..|          |:..|....|:...:.| ::.|::|.|.|.....|..|...|.   .|.|.
  Fly    70 DDDY----------VQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCK 124

  Fly   387 ECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGK---- 447
            :||........|..|:...|:...:..|:.|.|.|.:...||.|||:|:||||:.|::|.|    
  Fly   125 DCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFAR 189

  Fly   448 --------------------------SFTQNANLRQHKLRHSETKSFKCELCPHSFVTK------ 480
                                      ||:.|||||.|..||.:....:|.:|.:.|..:      
  Fly   190 GGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAH 254

  Fly   481 -----------------------AELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGER 522
                                   .:|.:|.:.||..|...||||...||.......|.|.|||||
  Fly   255 INQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGER 319

  Fly   523 PYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSK--TFTQRGDCQMH-QRTHQGERIYICPV 584
            ||.|.:|...|...:|||.|.|.||||:|:.|..|..  .|:|....:.| ::.|:.::.|:|..
  Fly   320 PYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEG 384

  Fly   585 CNEEFKSMPEMRSHL-------------AGHEQHDKRLV 610
            |::.||...|::||:             :|::..|.:::
  Fly   385 CHDFFKIKVELQSHVEHCAKCPVDGDKPSGNQSEDAQIL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 3/22 (14%)
COG5048 <357..570 CDD:227381 81/276 (29%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 427..451 CDD:290200 15/53 (28%)
C2H2 Zn finger 442..490 CDD:275368 18/106 (17%)
C2H2 Zn finger 470..487 CDD:275368 4/45 (9%)
zf-H2C2_2 482..507 CDD:290200 10/24 (42%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
zf-H2C2_2 510..534 CDD:290200 11/23 (48%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 539..563 CDD:290200 12/25 (48%)
C2H2 Zn finger 554..574 CDD:275368 5/22 (23%)
C2H2 Zn finger 582..602 CDD:275368 7/32 (22%)
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 45/158 (28%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
zf-H2C2_2 107..132 CDD:290200 7/24 (29%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
zf-H2C2_2 165..189 CDD:290200 13/23 (57%)
C2H2 Zn finger 180..200 CDD:275368 3/19 (16%)
COG5048 <192..369 CDD:227381 50/176 (28%)
C2H2 Zn finger 210..230 CDD:275370 8/19 (42%)
C2H2 Zn finger 238..260 CDD:275371 3/21 (14%)
C2H2 Zn finger 267..287 CDD:275368 2/19 (11%)
C2H2 Zn finger 295..315 CDD:275368 8/19 (42%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 5/22 (23%)
C2H2 Zn finger 382..399 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.050

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