DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6654 and CG11247

DIOPT Version :10

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:429 Identity:114/429 - (26%)
Similarity:174/429 - (40%) Gaps:101/429 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 RRGVVKQDVP----------ATPPSDAEPSPKQHRLGTQRK--LSAPRAGTVNGPSTTSGAATTP 325
            ||.|.|:|..          ::||:..|.||.......:||  |::.|...|:......|...:.
  Fly     5 RRSVSKEDAVSLLTDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSK 69

  Fly   326 ELKYHCDRCNAGFAVEKSLMIHRRQKGCINR-NYKCNECEKVFVSPDHLAEHQASHG---AHNCP 386
            :..|          |:..|....|:...:.| ::.|::|.|.|.....|..|...|.   .|.|.
  Fly    70 DDDY----------VQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCK 124

  Fly   387 ECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGK---- 447
            :||........|..|:...|:...:..|:.|.|.|.:...||.|||:|:||||:.|::|.|    
  Fly   125 DCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFAR 189

  Fly   448 --------------------------SFTQNANLRQHKLRHSETKSFKCELCPHSFVTK------ 480
                                      ||:.|||||.|..||.:....:|.:|.:.|..:      
  Fly   190 GGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAH 254

  Fly   481 -----------------------AELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGER 522
                                   .:|.:|.:.||..|...||||...||.......|.|.|||||
  Fly   255 INQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGER 319

  Fly   523 PYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSK--TFTQRGDCQMH-QRTHQGERIYICPV 584
            ||.|.:|...|...:|||.|.|.||||:|:.|..|..  .|:|....:.| ::.|:.::.|:|..
  Fly   320 PYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEG 384

  Fly   585 CNEEFKSMPEMRSHL-------------AGHEQHDKRLV 610
            |::.||...|::||:             :|::..|.:::
  Fly   385 CHDFFKIKVELQSHVEHCAKCPVDGDKPSGNQSEDAQIL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..78 CDD:214871
C2H2 Zn finger 331..354 CDD:275368 3/22 (14%)
COG5048 <357..570 CDD:227381 81/276 (29%)
C2H2 Zn finger 360..380 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..406 CDD:275370 5/20 (25%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
C2H2 Zn finger 442..490 CDD:275368 18/106 (17%)
C2H2 Zn finger 470..487 CDD:275368 4/45 (9%)
C2H2 Zn finger 498..518 CDD:275368 8/19 (42%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
C2H2 Zn finger 554..574 CDD:275368 5/22 (23%)
C2H2 Zn finger 582..602 CDD:275368 7/32 (22%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 45/158 (28%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
C2H2 Zn finger 180..200 CDD:275368 3/19 (16%)
COG5048 <192..369 CDD:227381 50/176 (28%)
C2H2 Zn finger 210..230 CDD:275370 8/19 (42%)
C2H2 Zn finger 238..260 CDD:275371 3/21 (14%)
C2H2 Zn finger 267..287 CDD:275368 2/19 (11%)
C2H2 Zn finger 295..315 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 5/22 (23%)
C2H2 Zn finger 382..399 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

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