DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6654 and ZNF880

DIOPT Version :9

Sequence 1:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001138906.1 Gene:ZNF880 / 400713 HGNCID:37249 Length:577 Species:Homo sapiens


Alignment Length:306 Identity:117/306 - (38%)
Similarity:146/306 - (47%) Gaps:12/306 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TPELKYHCDRCNAGFAVEKSLMIHRR-QKGCINRNYKCNECEKVFVSPDHLAEHQASHGA---HN 384
            |.|..|.|..|...|.....|..|.| ..|  .:.||||||.|||....|||.||..|..   :.
Human   263 TGEKPYKCHECGKVFTQNSHLANHHRIHTG--EKPYKCNECGKVFNRNAHLARHQKIHSGEKPYK 325

  Fly   385 CPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSF 449
            |.|||........|:.|:|. |......:||.|.|||...:.|..|.||||||||:.|..|||.|
Human   326 CKECGKAFSGGSGLTAHLVI-HTGEKLYKCNKCGKVFNRNAHLTRHQRIHTGEKPYECKECGKVF 389

  Fly   450 TQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVCLARFTTSCSLAKH 514
            .....|..|...|:..:.:||..|..:|...:.||:|...|||:||::|:.|...|....||:.|
Human   390 RHKFCLTNHHRMHTGEQPYKCNECGKAFRDCSGLTAHLLIHTGEKPYKCKECAKVFRHRLSLSNH 454

  Fly   515 KRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGERI 579
            :|.||||:||.||.|...||..:.|.||.|.||||:||.|..|.|.|:.......|::.|.||:.
Human   455 QRFHTGEKPYRCDECGKDFTRNSNLANHHRIHTGEKPYKCSECHKVFSHNSHLARHRQIHTGEKS 519

  Fly   580 YICPVCNEEFKSMPEMRSHLAGHEQHDKRLVH-----FTFLSNKEN 620
            |.|..|.:.|.....::.|...|........|     ||..||..|
Human   520 YKCNECGKVFSHKLYLKKHERIHTGEKPYRCHECGKDFTRNSNLAN 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368 7/23 (30%)
COG5048 <357..570 CDD:227381 91/215 (42%)
C2H2 Zn finger 360..380 CDD:275368 12/19 (63%)
C2H2 Zn finger 385..406 CDD:275370 7/20 (35%)
C2H2 Zn finger 414..434 CDD:275368 9/19 (47%)
zf-H2C2_2 427..451 CDD:290200 15/23 (65%)
C2H2 Zn finger 442..490 CDD:275368 15/47 (32%)
C2H2 Zn finger 470..487 CDD:275368 5/16 (31%)
zf-H2C2_2 482..507 CDD:290200 11/24 (46%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 510..534 CDD:290200 13/23 (57%)
C2H2 Zn finger 526..546 CDD:275368 9/19 (47%)
zf-H2C2_2 539..563 CDD:290200 14/23 (61%)
C2H2 Zn finger 554..574 CDD:275368 5/19 (26%)
C2H2 Zn finger 582..602 CDD:275368 4/19 (21%)
ZNF880NP_001138906.1 KRAB 7..65 CDD:214630
KRAB 7..46 CDD:279668
COG5048 162..568 CDD:227381 117/306 (38%)
C2H2 Zn finger 186..206 CDD:275368
zf-C2H2 212..234 CDD:278523
C2H2 Zn finger 214..234 CDD:275368
zf-H2C2_2 226..251 CDD:290200
C2H2 Zn finger 242..262 CDD:275368
zf-H2C2_2 255..279 CDD:290200 6/15 (40%)
C2H2 Zn finger 270..290 CDD:275368 6/19 (32%)
zf-H2C2_2 282..307 CDD:290200 13/26 (50%)
C2H2 Zn finger 298..318 CDD:275368 12/19 (63%)
zf-H2C2_2 310..334 CDD:290200 10/23 (43%)
C2H2 Zn finger 326..346 CDD:275368 7/20 (35%)
zf-C2H2 352..374 CDD:278523 9/21 (43%)
C2H2 Zn finger 354..374 CDD:275368 9/19 (47%)
zf-H2C2_2 366..391 CDD:290200 15/24 (63%)
C2H2 Zn finger 382..402 CDD:275368 7/19 (37%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
zf-H2C2_2 450..475 CDD:290200 14/24 (58%)
C2H2 Zn finger 466..486 CDD:275368 9/19 (47%)
zf-H2C2_2 478..503 CDD:290200 14/24 (58%)
C2H2 Zn finger 494..514 CDD:275368 5/19 (26%)
zf-H2C2_2 506..531 CDD:290200 8/24 (33%)
C2H2 Zn finger 522..542 CDD:275368 4/19 (21%)
zf-H2C2_2 534..559 CDD:290200 4/24 (17%)
C2H2 Zn finger 550..570 CDD:275368 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.