Sequence 1: | NP_650429.1 | Gene: | CG6654 / 41831 | FlyBaseID: | FBgn0038301 | Length: | 639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
Alignment Length: | 635 | Identity: | 147/635 - (23%) |
---|---|---|---|
Similarity: | 218/635 - (34%) | Gaps: | 158/635 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 GSCLADMIREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFKIKCENSSRTLRQLLPNALPEEPDS 90
Fly 91 KVSISCPVATTDQAVQTTSWEPDRCTASVQTDAVTTTDAEQN---------------------TS 134
Fly 135 LIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLKDEKEVVFTQTNVIYEGDDHELE 199
Fly 200 QQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQEN-DKHQTPVGSKEEARELEKEQV 263
Fly 264 P-QSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAPRAGTVNGPSTTS-------- 319
Fly 320 GAATTPELKYHCDRCNAGFAVEKSLMIH-RRQKGCINRNYKCNECEKVFVSPDHLAEH----QAS 379
Fly 380 HGAHNCPECGIRCDSKEALSKHMVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTGEKPFVCNI 444
Fly 445 CGKSFTQNANLRQHKLRHS--ETKSFKCELCPHSFVTKAELTSHAR-THTGDKPFECEVCLARFT 506
Fly 507 TSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMH- 570
Fly 571 --------QRTHQGERIYICPVCNEEFKSMPEMRSHLAGHEQ----HDKR 608 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6654 | NP_650429.1 | zf-AD | 6..79 | CDD:285071 | 9/52 (17%) |
C2H2 Zn finger | 331..354 | CDD:275368 | 6/23 (26%) | ||
COG5048 | <357..570 | CDD:227381 | 71/219 (32%) | ||
C2H2 Zn finger | 360..380 | CDD:275368 | 6/23 (26%) | ||
C2H2 Zn finger | 385..406 | CDD:275370 | 6/20 (30%) | ||
C2H2 Zn finger | 414..434 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 427..451 | CDD:290200 | 13/23 (57%) | ||
C2H2 Zn finger | 442..490 | CDD:275368 | 20/50 (40%) | ||
C2H2 Zn finger | 470..487 | CDD:275368 | 6/16 (38%) | ||
zf-H2C2_2 | 482..507 | CDD:290200 | 8/25 (32%) | ||
C2H2 Zn finger | 498..518 | CDD:275368 | 3/19 (16%) | ||
zf-H2C2_2 | 510..534 | CDD:290200 | 8/23 (35%) | ||
C2H2 Zn finger | 526..546 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 539..563 | CDD:290200 | 8/23 (35%) | ||
C2H2 Zn finger | 554..574 | CDD:275368 | 7/28 (25%) | ||
C2H2 Zn finger | 582..602 | CDD:275368 | 6/19 (32%) | ||
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 15/95 (16%) |
C2H2 Zn finger | 296..316 | CDD:275368 | 4/24 (17%) | ||
COG5048 | 321..>621 | CDD:227381 | 90/302 (30%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 5/21 (24%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 9/25 (36%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 6/20 (30%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 7/21 (33%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 13/23 (57%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 10/19 (53%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 7/17 (41%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 3/19 (16%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 8/24 (33%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 587..609 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 589..609 | CDD:275368 | 6/19 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |